RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PON3Q15166 354 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 OR1C1Q15619 314 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 SLC22A10Q63ZE4 541 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 ESPNLQ6ZVH7 1005 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 EXTL1Q92935 676 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 SGTBQ96EQ0 304 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 SGCZQ96LD1 299 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 UTP23Q9BRU9 249 aaKnown RBP20.41■□□□□ 0.86
USF3-203ENST00000491165 SMG1Q96Q15 3661 aaKnown RBP20.41■□□□□ 0.86
USF3-203ENST00000491165 MCIDASD6RGH6 385 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 CTDSPLO15194 276 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 ZNF264O43296 627 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 NOS1APO75052 506 aaPredicted RBP20.41■□□□□ 0.86
USF3-203ENST00000491165 H2AFB2P0C5Z0 115 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 CCR6P51684 374 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 P2RX3P56373 397 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 UBE2NLQ5JXB2 153 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 ZBTB37Q5TC79 503 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 TIGD4Q8IY51 512 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 DND1Q8IYX4 353 aaKnown RBP20.41■□□□□ 0.86
USF3-203ENST00000491165 OR8H1Q8NGG4 311 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 LGALS14Q8TCE9 139 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 MRPL48Q96GC5 212 aaKnown RBP20.41■□□□□ 0.86
USF3-203ENST00000491165 CMTM3Q96MX0 182 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 WIF1Q9Y5W5 379 aa20.41■□□□□ 0.86
USF3-203ENST00000491165 ANKRD61A6NGH8 418 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 ZNF879B4DU55 563 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 HCRTR2O43614 444 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 WISP1O95388 367 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 DYRK1AQ13627 763 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 KLF9Q13886 244 aaPredicted RBP20.4■□□□□ 0.86
USF3-203ENST00000491165 GSG1Q2KHT4 349 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 TMEM81Q6P7N7 255 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 IGFL2Q6UWQ7 119 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 BTN2A1Q7KYR7 527 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 CMIPQ8IY22 773 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 FAM109AQ8N4B1 249 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 ANGPTL6Q8NI99 470 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 SMIM4Q8WVI0 70 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 FREM3P0C091 2139 aa20.4■□□□□ 0.86
USF3-203ENST00000491165 OR5H15A6NDH6 313 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 SLC25A12O75746 678 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 RPL4P36578 427 aaKnown RBP20.39■□□□□ 0.86
USF3-203ENST00000491165 DNASE1L1P49184 302 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 DIO1P49895 249 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 SNTB2Q13425 540 aaKnown RBP20.39■□□□□ 0.86
USF3-203ENST00000491165 ZSWIM7Q19AV6 140 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 WDSUB1Q8N9V3 476 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 OIT3Q8WWZ8 545 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 PHYHIPQ92561 330 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 PDCD1LG2Q9BQ51 273 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 ANGPTL4Q9BY76 406 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 B3GNT2Q9NY97 397 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 ABI3Q9P2A4 366 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 RABL2AQ9UBK7 228 aaPredicted RBP20.39■□□□□ 0.86
USF3-203ENST00000491165 RABL2BQ9UNT1 228 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 ADAM18Q9Y3Q7 739 aa20.39■□□□□ 0.86
USF3-203ENST00000491165 GPRIN2O60269 458 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 MT-ND4P03905 459 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 CXCL3P19876 107 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 PER3P56645 1201 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 TOMM34Q15785 309 aaPredicted RBP20.39■□□□□ 0.85
USF3-203ENST00000491165 TBR1Q16650 682 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 DPY19L2P2Q6ZN68 376 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 MDS2Q8NDY4 140 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 GIMAP1Q8WWP7 306 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 HAS2Q92819 552 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 ACTR6Q9GZN1 396 aa20.39■□□□□ 0.85
USF3-203ENST00000491165 PCDHGA9Q9Y5G4 932 aaKnown RBP20.39■□□□□ 0.85
USF3-203ENST00000491165 PKD1L2Q7Z442 2459 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 PINLYPA6NC86 204 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 MST1P26927 711 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 CCR4P51679 360 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 UCNP55089 124 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 SLC35D3Q5M8T2 416 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 UNQ9370/PRO34162Q6UXP9 181 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 PRSS45Q7RTY3 260 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 KDF1Q8NAX2 398 aaPredicted RBP20.38■□□□□ 0.85
USF3-203ENST00000491165 MED11Q9P086 117 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 FBXL2Q9UKC9 423 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 COPS3Q9UNS2 423 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 MED12Q93074 2177 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 SELENOFO60613 162 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 ARG2P78540 354 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 COL28A1Q2UY09 1125 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 FGD2Q7Z6J4 655 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 NPEPL1Q8NDH3 523 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 OR56B4Q8NH76 319 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 DACT3Q96B18 629 aaPredicted RBP20.38■□□□□ 0.85
USF3-203ENST00000491165 NMNAT3Q96T66 252 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 NPAS1Q99742 590 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 AUNIPQ9H7T9 357 aa20.38■□□□□ 0.85
USF3-203ENST00000491165 ZNF275Q9NSD4 429 aaPredicted RBP20.38■□□□□ 0.85
USF3-203ENST00000491165 ELF5Q9UKW6 265 aaPredicted RBP20.38■□□□□ 0.85
USF3-203ENST00000491165 A0A1B0GVI7 797 aa20.37■□□□□ 0.85
USF3-203ENST00000491165 SPI1P17947 270 aa20.37■□□□□ 0.85
USF3-203ENST00000491165 SRMP19623 302 aa20.37■□□□□ 0.85
USF3-203ENST00000491165 GDNFP39905 211 aa20.37■□□□□ 0.85
USF3-203ENST00000491165 PSMB10P40306 273 aa20.37■□□□□ 0.85
USF3-203ENST00000491165 CASRP41180 1078 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms