RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 INIPQ9NRY2 104 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 GPR160Q9UJ42 338 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 RIMS3Q9UJD0 308 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 WNK1Q9H4A3 2382 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 IQCMA0A1B0GVH7 501 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 A0A1W2PRG6 482 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 TRAPPC2LH3BP13 241 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 FXYD1O00168 92 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 PIP5K1CO60331 668 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 PTHP01270 115 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 CCNOP22674 350 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 APLNRP35414 380 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF84P51523 738 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 UBA52P62987 128 aaKnown RBP13.14□□□□□ -0.31
COL2A1-207ENST00000490609 ERVK-25P63136 954 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 LCN2P80188 198 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 TEKQ02763 1124 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 PLP2Q04941 152 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 HFEQ30201 348 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 RABL3Q5HYI8 236 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 KLF17Q5JT82 389 aaPredicted RBP13.14□□□□□ -0.31
COL2A1-207ENST00000490609 FAM209AQ5JX71 171 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 FAM27BQ5VT28 67 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 NANOGP8Q6NSW7 305 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 GEMIN6Q8WXD5 167 aaKnown RBP13.14□□□□□ -0.31
COL2A1-207ENST00000490609 RAB39BQ96DA2 213 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
COL2A1-207ENST00000490609 C7orf69Q9H7B7 122 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 NPHS2Q9NP85 383 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 DECR2Q9NUI1 292 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 SH3GLB1Q9Y371 365 aa13.14□□□□□ -0.31
COL2A1-207ENST00000490609 NPIPB13A6NJU9 1138 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 NPIPB4C9JG80 1138 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 ENTPD5O75356 428 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 PRSS23O95084 383 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 IGHV2-70P01814 119 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 CD55P08174 381 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 RBM34P42696 430 aaKnown RBP13.13□□□□□ -0.31
COL2A1-207ENST00000490609 OR1E2P47887 323 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 SEC61A1P61619 476 aaKnown RBP13.13□□□□□ -0.31
COL2A1-207ENST00000490609 ENDOGQ14249 297 aaKnown RBP13.13□□□□□ -0.31
COL2A1-207ENST00000490609 SGCAQ16586 387 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF718Q3SXZ3 478 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 Q6ZR03 302 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 SGMS2Q8NHU3 365 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 NANPQ8TBE9 248 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 TMEM239Q8WW34 195 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 NSMAFQ92636 917 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 SGTBQ96EQ0 304 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF48Q96MX3 618 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-207ENST00000490609 SUCNR1Q9BXA5 334 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 OR2H1Q9GZK4 316 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 SMURF2Q9HAU4 748 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 MSL2Q9HCI7 577 aa13.13□□□□□ -0.31
COL2A1-207ENST00000490609 OR5F1O95221 314 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 LAP3P28838 519 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 HSF2Q03933 536 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 PSG7Q13046 419 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 CDK5R2Q13319 367 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 NFYCQ13952 458 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF774Q6NX45 483 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 SLC30A8Q8IWU4 369 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-207ENST00000490609 TAF15Q92804 592 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL2A1-207ENST00000490609 RAB1CQ92928 201 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 ELMOD3Q96FG2 381 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 SIGLEC11Q96RL6 698 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 RABEP2Q9H5N1 569 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 POLR3KQ9Y2Y1 108 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-207ENST00000490609 PCDHGB1Q9Y5G3 927 aa13.12□□□□□ -0.31
COL2A1-207ENST00000490609 SOX21Q9Y651 276 aaPredicted RBP13.12□□□□□ -0.31
COL2A1-207ENST00000490609 PPIAL4EA0A075B759 164 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 MCIDASD6RGH6 385 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 PPIAL4DF5H284 164 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 TMPRSS2O15393 492 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 TPD52L2O43399 206 aaKnown RBP13.11□□□□□ -0.31
COL2A1-207ENST00000490609 IGHMP01871 453 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 CST2P09228 141 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 PPIAL4FP0DN26 164 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 DRD4P21917 467 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 LIMS1P48059 325 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 DAP3P51398 398 aaKnown RBP13.11□□□□□ -0.31
COL2A1-207ENST00000490609 PPP1CBP62140 327 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 SCGB2A2Q13296 93 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 MOGQ16653 247 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 PRR31Q5SQ13 230 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
COL2A1-207ENST00000490609 ZMYND19Q96E35 227 aaPredicted RBP13.11□□□□□ -0.31
COL2A1-207ENST00000490609 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms