RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CA11O75493 328 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 FCN3O75636 299 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 CCNB2O95067 398 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 FARS2O95363 451 aaKnown RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ALDOBP05062 364 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF853P0CG23 659 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF43P17038 809 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 MDKP21741 143 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 COX7A1P24310 79 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 GABRR2P28476 465 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 PCK1P35558 622 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 CFHR2P36980 270 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 CX3CR1P49238 355 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 CCNHP51946 323 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 NUP107P57740 925 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 TSPAN5P62079 268 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF630Q2M218 657 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 TRIM16LQ309B1 348 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 REEP3Q6NUK4 255 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 RNF165Q6ZSG1 346 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC26A11Q86WA9 606 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 LRRC6Q86X45 466 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 KIR3DL3Q8N743 410 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATP6V0D2Q8N8Y2 350 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 HTR3CQ8WXA8 447 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 MRPS31Q92665 395 aaKnown RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 GTF2H4Q92759 462 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ECHDC3Q96DC8 303 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 PGLYRP4Q96LB8 373 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 C9orf72Q96LT7 481 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 TSSK3Q96PN8 268 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ANGPTL4Q9BY76 406 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 RAB34Q9BZG1 259 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 NHEJ1Q9H9Q4 299 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 GPATCH2LQ9NWQ4 482 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 SIGLEC8Q9NYZ4 499 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATPIF1Q9UII2 106 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 UGT2A1Q9Y4X1 527 aa3.25□□□□□ -1.89
HMGB1P38-201ENST00000490557 A0A1B0GUA9 196 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 A0A1B0GW15 77 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 MGAT4DA6NG13 374 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 ITGB1BP1O14713 200 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 AHSA1O95433 338 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 RPN2P04844 631 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 IFNW1P05000 195 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 DCNP07585 359 aaKnown RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 CT62P0C5K7 136 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 OCMP0CE72 109 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 PNMA6AP0CW24 399 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 PSMB6P28072 239 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 HOXA6P31267 233 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 FGF9P31371 208 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 LEPP41159 167 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 UBE2G2P60604 165 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 SELENBP1Q13228 472 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 PON2Q15165 354 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 MPPED2Q15777 294 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 ZNF77Q15935 545 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 PAGE3Q5JUK9 113 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 LY6G6FQ5SQ64 297 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 IGFL2Q6UWQ7 119 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMIGD1Q6UXZ0 262 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 ASCL4Q6XD76 172 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 IL34Q6ZMJ4 242 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC35D2Q76EJ3 337 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 HDDC2Q7Z4H3 204 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 DCXRQ7Z4W1 244 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 ABHD12BQ7Z5M8 362 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 TTC29Q8NA56 475 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR52E5Q8NH55 327 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 PLPPR1Q8TBJ4 325 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 TCP10LQ8TDR4 215 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 FAM151AQ8WW52 585 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 STMN2Q93045 179 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 UCN3Q969E3 161 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 CCDC126Q96EE4 140 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 TSG101Q99816 390 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 CTRCQ99895 268 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 C7orf50Q9BRJ6 194 aaKnown RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 NIPSNAP3BQ9BS92 247 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 HES7Q9BYE0 225 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 API5Q9BZZ5 524 aaKnown RBP3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 RACGAP1Q9H0H5 632 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 GBA3Q9H227 469 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC38A10Q9HBR0 1119 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 VCX3AQ9NNX9 186 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 SLC17A7Q9P2U7 560 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 NEU3Q9UQ49 428 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 PRELID1Q9Y255 219 aa3.24□□□□□ -1.89
HMGB1P38-201ENST00000490557 A0A0A6YYH2 397 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 TRBV9A0A0B4J1U6 114 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 A6NJ64 397 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 TMEM210A6NLX4 147 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 PANO1I0J062 215 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 NDUFAB1O14561 156 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 COCHO43405 550 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 CHST1O43916 411 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 ENTPD5O75356 428 aa3.23□□□□□ -1.89
HMGB1P38-201ENST00000490557 CST4P01036 141 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms