RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ZXDCQ2QGD7 858 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 LRRC37A5PQ49AS3 106 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF311Q5JNZ3 666 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ARMC6Q6NXE6 501 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 STEAP1BQ6NZ63 245 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 NIPAL3Q6P499 406 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RPL22L1Q6P5R6 122 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TPGS1Q6ZTW0 290 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SERPINA9Q86WD7 417 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 MMP21Q8N119 569 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CISD2Q8N5K1 135 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FRMD1Q8N878 549 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ACOT4Q8N9L9 421 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2T33Q8NG76 320 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR10A7Q8NGE5 316 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR5AK3PQ8NH89 298 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 LKAAEAR1Q8TD35 194 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 WFIKKN2Q8TEU8 576 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 C22orf15Q8WYQ4 148 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 MUCL1Q96DR8 90 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ADGRG7Q96K78 797 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 C4orf36Q96KX1 117 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SAMD8Q96LT4 415 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PACRGQ96M98 296 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 WDR92Q96MX6 357 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2M4Q96R27 311 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TBX5Q99593 518 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 WFDC6Q9BQY6 131 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FBXO44Q9H4M3 255 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ANKRD10Q9NXR5 420 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 IL17CQ9P0M4 197 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DNAJB11Q9UBS4 358 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 IL20RAQ9UHF4 553 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC22A14Q9Y267 594 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 V9GYS6 101 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 EVPLQ92817 2033 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SZT2Q5T011 3432 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A087WWC5 75 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A087WZY1 265 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A0B4J2A0 478 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A1W2PPE2 198 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 DCTN6O00399 190 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GPRIN2O60269 458 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 TIAF1O95411 115 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC2A10O95528 541 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 F13BP05160 661 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 PTHLHP12272 177 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 OR1E1P30953 314 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 THBS4P35443 961 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SOAT1P35610 550 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 MC3RP41968 323 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 CCL23P55773 120 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 TAS2R19P59542 299 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 RPS23P62266 143 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 RPS11P62280 158 aaKnown RBP eCLIP4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ACTC1P68032 377 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ACTA1P68133 377 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SIRPAP78324 504 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 BEX3Q00994 111 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF85Q03923 595 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 TLE4Q04727 773 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 DHRS2Q13268 280 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 DECR1Q16698 335 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GXYLT1Q4G148 440 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 PRAMEF17Q5VTA0 474 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 FBXW9Q5XUX1 488 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2T2Q6IF00 324 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM71E1Q6IPT2 247 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF529Q6P280 563 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF585AQ6P3V2 769 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ULK3Q6PHR2 472 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SERPINA13PQ6UXR4 307 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC16A14Q7RTX9 510 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 TMED4Q7Z7H5 227 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 LRRTM4Q86VH4 590 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 VRK2Q86Y07 508 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF573Q86YE8 665 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 DND1Q8IYX4 353 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 CLDN19Q8N6F1 224 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM229BQ8NBD8 167 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ADPRHL1Q8NDY3 354 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 CHST13Q8NET6 341 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 OR13C5Q8NGS8 318 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR148Q8TDV2 347 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 C16orf78Q8WTQ4 265 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 MITD1Q8WV92 249 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 ASB11Q8WXH4 323 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 DCUN1D4Q92564 292 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SMIM19Q96E16 107 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 AMDHD1Q96NU7 426 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GFI1Q99684 422 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BLQ99880 126 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 RNF126Q9BV68 326 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 POTEKPQ9BYX7 375 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 RAB33BQ9H082 229 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC25A31Q9H0C2 315 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SRMSQ9H3Y6 488 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms