RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SLC36A3Q495N2 470 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 LEG1Q6P5S2 330 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 DTX2Q86UW9 622 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 LRRC75A-AS1Q8N1F1 130 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 NPEPL1Q8NDH3 523 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 OR52E2Q8NGJ4 325 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 OR1J2Q8NGS2 313 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 OR2T4Q8NH00 348 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 OR4K13Q8NH42 304 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 NMNAT3Q96T66 252 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 CCL19Q99731 98 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 FOXC2Q99958 501 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 SH3GL3Q99963 347 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 DHRS9Q9BPW9 319 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 NUAK2Q9H093 628 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF442Q9H7R0 627 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 RNF121Q9H920 327 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 SEC61A2Q9H9S3 476 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 NOX3Q9HBY0 568 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 PAPOLBQ9NRJ5 636 aaKnown RBP9.62□□□□□ -0.87
CPSF7-212ENST00000489728 CMC2Q9NRP2 79 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 CISD1Q9NZ45 108 aaKnown RBP9.62□□□□□ -0.87
CPSF7-212ENST00000489728 ATPIF1Q9UII2 106 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 KCNG2Q9UJ96 466 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 SPEF1Q9Y4P9 236 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 TIMM10BQ9Y5J6 103 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 SPG11Q96JI7 2443 aa9.62□□□□□ -0.87
CPSF7-212ENST00000489728 IQCMA0A1B0GVH7 501 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 VSTM5A8MXK1 200 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ATP6V1G2-DDX39BF2Z307 99 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 DANCRP0C864 163 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 COX5BP10606 129 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF35P13682 527 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF23P17027 643 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF3P17036 446 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 BLVRAP53004 296 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SLC25A1P53007 311 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 RPS23P62266 143 aaKnown RBP9.61□□□□□ -0.87
CPSF7-212ENST00000489728 PIGFQ07326 219 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SPOCK1Q08629 439 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 AQP6Q13520 282 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ENDOGQ14249 297 aaKnown RBP9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SGCAQ16586 387 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ZSCAN26Q16670 478 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 TBC1D28Q2M2D7 210 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 DEFB113Q30KQ7 82 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF362Q5T0B9 420 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-212ENST00000489728 AGAP6Q5VW22 663 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 UNQ6126/PRO20091Q6UXV3 157 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 C1orf174Q8IYL3 243 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 ALDH16A1Q8IZ83 802 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 HS3ST5Q8IZT8 346 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 OR6V1Q8N148 313 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 LRRC18Q8N456 261 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SDR9C7Q8NEX9 313 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SLC26A10Q8NG04 563 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 OR4Q3Q8NH05 313 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SMAP2Q8WU79 429 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-212ENST00000489728 TMEM171Q8WVE6 324 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 IPCEF1Q8WWN9 437 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-212ENST00000489728 PYDC1Q8WXC3 89 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 LRTOMTQ8WZ04 291 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 NRGNQ92686 78 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 DDOQ99489 341 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 PRRG3Q9BZD7 231 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 CXXC4Q9H2H0 198 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 SLC25A19Q9HC21 320 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 RPRD1BQ9NQG5 326 aaKnown RBP9.61□□□□□ -0.87
CPSF7-212ENST00000489728 B9D1Q9UPM9 204 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 MOKQ9UQ07 419 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 PLEKHA6Q9Y2H5 1048 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 CADP27708 2225 aa9.61□□□□□ -0.87
CPSF7-212ENST00000489728 OR6C68A6NDL8 312 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 E7EQL1 145 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 H3BNX3 289 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 ICMTO60725 284 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 HMGN1P05114 100 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 CELA3BP08861 270 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 GAAP10253 952 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 BMP4P12644 408 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF32P17041 273 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 PAICSP22234 425 aaKnown RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 PRKACGP22612 351 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 PCSK6P29122 969 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 APOBEC3AP31941 199 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 TTKP33981 857 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 NKX6-1P78426 367 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 CDK5Q00535 292 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 HSF2Q03933 536 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 SLC35F1Q5T1Q4 408 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 KDM4DQ6B0I6 523 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 MYPOPQ86VE0 399 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF584Q8IVC4 421 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 FBXL14Q8N1E6 418 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 SLC37A3Q8NCC5 494 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 SLC30A7Q8NEW0 376 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 FGFBP3Q8TAT2 258 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms