RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CHP2O43745 196 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 OR2T1O43869 369 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 EFNA2O43921 213 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 EIF1BO60739 113 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 OR5F1O95221 314 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 PMS2P2O95744 297 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 RPSAP08865 295 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 THRBP10828 461 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ITGA2P17301 1181 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 HTR2AP28223 471 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 SHC1P29353 583 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 CEACAM8P31997 349 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 OR1E2P47887 323 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 TPD52P55327 224 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 CHRNB3Q05901 458 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 MYBPHQ13203 477 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 RNPS1Q15287 305 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ZNF239Q16600 458 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 LRRC36Q1X8D7 754 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 CTU2Q2VPK5 515 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 SLC25A35Q3KQZ1 300 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 LCE5AQ5TCM9 118 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 LPCAT4Q643R3 524 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 TTC33Q6PID6 262 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 NCCRP1Q6ZVX7 275 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 FCRLAQ7L513 359 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 VTCN1Q7Z7D3 282 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 COMTD1Q86VU5 262 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 RPRMLQ8N4K4 120 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 MARVELD2Q8N4S9 558 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 PACRGLQ8N7B6 248 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 CNEP1R1Q8N9A8 125 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 C9orf106Q8NAJ2 232 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ACBD4Q8NC06 268 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 PAPD5Q8NDF8 572 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 FNDC9Q8TBE3 224 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 PIGXQ8TBF5 258 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ADAMTS16Q8TE57 1224 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 CANT1Q8WVQ1 401 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ZNF524Q96C55 264 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 INTS12Q96CB8 462 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 TRMT61AQ96FX7 289 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 GMPPAQ96IJ6 420 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 MPP4Q96JB8 637 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ZNF570Q96NI8 536 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 NR1H4Q96RI1 486 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 PKP2Q99959 881 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ABHD14AQ9BUJ0 271 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 SFXN3Q9BWM7 321 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 OR11A1Q9GZK7 315 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 RNF122Q9H9V4 155 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 KCNJ16Q9NPI9 418 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 DCAF13Q9NV06 445 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 KLHL9Q9P2J3 617 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 C11orf21Q9P2W6 132 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 ZNF629Q9UEG4 869 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
TRAPPC12-221ENST00000489032 COL6A5A8TX70 2615 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 FBN1P35555 2871 aaKnown RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 TRAV36DV7A0A075B6V5 113 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 A0A087WUJ7 227 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 LINC01548A6NM66 108 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 TGM6O95932 706 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 TK1P04183 234 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 TNFRSF1BP20333 461 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 CRYBA2P53672 197 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 CDH12P55289 794 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 FAM3BP58499 235 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 RASGEF1BQ0VAM2 473 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 ST3GAL3Q11203 375 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 MED21Q13503 144 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 OR7A5Q15622 319 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 NPTX1Q15818 432 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 ANXA2RQ3ZCQ2 193 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 C1orf140Q5VVS0 124 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 RBM45Q8IUH3 476 aaKnown RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 CCDC71Q8IV32 467 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 GCNT2Q8N0V5 402 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 C10orf53Q8N6V4 93 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 OR4D11Q8NGI4 311 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 LILRB4Q8NHJ6 448 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 ROBO4Q8WZ75 1007 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 NRGNQ92686 78 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 SLCO4A1Q96BD0 722 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 SLC41A3Q96GZ6 507 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 CENPNQ96H22 339 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 PYURFQ96I23 114 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 ARL5BQ96KC2 179 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 PRRC1Q96M27 445 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 SMR3AQ99954 134 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 TMEM43Q9BTV4 400 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 C9orf16Q9BUW7 83 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 FNDC11Q9BVV2 318 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 SRXN1Q9BYN0 137 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 PIGMQ9H3S5 423 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 MAGIXQ9H6Y5 334 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 COQ10BQ9H8M1 238 aa7.09□□□□□ -1.27
TRAPPC12-221ENST00000489032 FANCFQ9NPI8 374 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms