RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 OR2T27Q8NH04 317 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 BOD1Q96IK1 185 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 FOXN4Q96NZ1 517 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 FOXB1Q99853 325 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 CDCA4Q9BXL8 241 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 WDR76Q9H967 626 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 INPP5EQ9NRR6 644 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 SH3BGRL2Q9UJC5 107 aa14.09□□□□□ -0.15
CLDN11-208ENST00000488989 EXOSC1Q9Y3B2 195 aaKnown RBP14.09□□□□□ -0.15
CLDN11-208ENST00000488989 ZFYVE26Q68DK2 2539 aa14.08□□□□□ -0.15
CLDN11-208ENST00000488989 A0A087WXM4 84 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 A0A1W2PPL8 197 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 HLA-DQA2P01906 255 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 MT-ND2P03891 347 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 MRPL3P09001 348 aaKnown RBP14.08□□□□□ -0.16
CLDN11-208ENST00000488989 SMIM18P0DKX4 95 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 COX5AP20674 150 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 MSR1P21757 451 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 EEF1B2P24534 225 aaKnown RBP14.08□□□□□ -0.16
CLDN11-208ENST00000488989 CDAP32320 146 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 ATP6V1E1P36543 226 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 NAA10P41227 235 aaPredicted RBP14.08□□□□□ -0.16
CLDN11-208ENST00000488989 CDH15P55291 814 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 FOXG1P55316 489 aaPredicted RBP14.08□□□□□ -0.16
CLDN11-208ENST00000488989 ACTC1P68032 377 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 ACTA1P68133 377 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 TLE1Q04724 770 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 PIGFQ07326 219 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 FAM27BQ5VT28 67 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 SHFQ7M4L6 423 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 CDC20BQ86Y33 519 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 ERI1Q8IV48 349 aaKnown RBP14.08□□□□□ -0.16
CLDN11-208ENST00000488989 SLC35F2Q8IXU6 374 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 GABRG1Q8N1C3 465 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 ACBD7Q8N6N7 88 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 TSPAN14Q8NG11 270 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 RND1Q92730 232 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 PIGMQ9H3S5 423 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 SIAEQ9HAT2 523 aa14.08□□□□□ -0.16
CLDN11-208ENST00000488989 HIVEP3Q5T1R4 2406 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 C12orf71A8MTZ7 269 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF593O00488 134 aaPredicted RBP14.07□□□□□ -0.16
CLDN11-208ENST00000488989 MSTNO14793 375 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 C1QL1O75973 258 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ITGA5P08648 1049 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 PSKH1P11801 424 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF823P16415 610 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ALOX5APP20292 161 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 GUCA1AP43080 201 aaPredicted RBP14.07□□□□□ -0.16
CLDN11-208ENST00000488989 TUBA4AP68366 448 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ADAM8P78325 824 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ENDOGQ14249 297 aaKnown RBP14.07□□□□□ -0.16
CLDN11-208ENST00000488989 MEP1BQ16820 701 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 SOWAHCQ53LP3 525 aaPredicted RBP14.07□□□□□ -0.16
CLDN11-208ENST00000488989 BEND4Q6ZU67 534 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 SPARTQ8N0X7 666 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 UBE2J2Q8N2K1 259 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF843Q8N446 348 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF610Q8N9Z0 462 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 OR6N2Q8NGY6 317 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 OTOSQ8NHW6 89 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 WACQ9BTA9 647 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 SEC61A2Q9H9S3 476 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 CYB5R1Q9UHQ9 305 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 COPS3Q9UNS2 423 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 TMEM14AQ9Y6G1 99 aa14.07□□□□□ -0.16
CLDN11-208ENST00000488989 CCL21O00585 134 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 CST2P09228 141 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 LIMS3P0CW19 117 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 LIMS4P0CW20 117 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 PCMT1P22061 227 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 IGHV1-2P23083 117 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 ARF1P84077 181 aaKnown RBP14.06□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF85Q03923 595 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 TBCEQ15813 527 aaPredicted RBP14.06□□□□□ -0.16
CLDN11-208ENST00000488989 NCCRP1Q6ZVX7 275 aaPredicted RBP14.06□□□□□ -0.16
CLDN11-208ENST00000488989 DPY19L4Q7Z388 723 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 EGFL6Q8IUX8 553 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 SLC22A24Q8N4F4 322 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF454Q8N9F8 522 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 OR10H4Q8NGA5 316 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 OR10H5Q8NGA6 315 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 OR1K1Q8NGR3 316 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 OPN3Q9H1Y3 402 aaPredicted RBP14.06□□□□□ -0.16
CLDN11-208ENST00000488989 EMC7Q9NPA0 242 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 ERVK13-1Q9NX77 482 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 TAS2R16Q9NYV7 291 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 JKAMPQ9P055 326 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 LHFPL6Q9Y693 200 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 CFAP46Q8IYW2 2715 aa14.06□□□□□ -0.16
CLDN11-208ENST00000488989 DIDO1Q9BTC0 2240 aaKnown RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 A0A1B0GUH1 482 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 A0A1W2PQL4 384 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 TMEM129A0AVI4 362 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 A8MXE2 369 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF670-ZNF695F2Z2N8 137 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 PHYHO14832 338 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 TMCC2O75069 709 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 OR8G3PP0DMU2 310 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 MYL12AP19105 171 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms