RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ADAM21Q9UKJ8 722 aa20.41■□□□□ 0.86
RNF38-208ENST00000488058 IER3IP1Q9Y5U9 82 aa20.41■□□□□ 0.86
RNF38-208ENST00000488058 SOCS2O14508 198 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 SYNGR3O43761 229 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 OR10H3O60404 316 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 MSR1P21757 451 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 CALB2P22676 271 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 ALDH3B1P43353 468 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 GGTLC2Q14390 218 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 MAD2L1BPQ15013 274 aaPredicted RBP20.4■□□□□ 0.86
RNF38-208ENST00000488058 FAM27BQ5VT28 67 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 FOXN4Q96NZ1 517 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 GPA33Q99795 319 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 YAE1D1Q9NRH1 226 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 MYEF2Q9P2K5 600 aaKnown RBP20.4■□□□□ 0.86
RNF38-208ENST00000488058 REV1Q9UBZ9 1251 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 TMCC3Q9ULS5 477 aa20.4■□□□□ 0.86
RNF38-208ENST00000488058 A0A096LNT2 108 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 PRSS37A4D1T9 235 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 CST2P09228 141 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 DAOP14920 347 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 STOMP27105 288 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 SDHAP31040 664 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 EVX1P49640 407 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 ERVS71-1P61550 626 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 PSG4Q00888 419 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 LOXL1Q08397 574 aaPredicted RBP20.39■□□□□ 0.85
RNF38-208ENST00000488058 ALKBH6Q3KRA9 238 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 FOXL2NBQ6ZUU3 175 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 FANK1Q8TC84 345 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 EMC7Q9NPA0 242 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 IL1RAPQ9NPH3 570 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 NRIP3Q9NQ35 241 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 ACTR3BQ9P1U1 418 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 CSPG4Q6UVK1 2322 aa20.39■□□□□ 0.85
RNF38-208ENST00000488058 LOC390937A0A1W2PQ73 354 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 NDUFS8O00217 210 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 CD5LO43866 347 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 SNAP29O95721 258 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 IGFBP1P08833 259 aaPredicted RBP20.38■□□□□ 0.85
RNF38-208ENST00000488058 USF1P22415 310 aaPredicted RBP20.38■□□□□ 0.85
RNF38-208ENST00000488058 RAD52P43351 418 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 GDI2P50395 445 aaKnown RBP20.38■□□□□ 0.85
RNF38-208ENST00000488058 RPS6KA3P51812 740 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 FXYD6P3P58550 94 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 TMEM249Q2WGJ8 235 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 GPR139Q6DWJ6 353 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 SMARCD3Q6STE5 483 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 DPY19L2P2Q6ZN68 376 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 ZER1Q7Z7L7 766 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 GPX7Q96SL4 187 aaPredicted RBP20.38■□□□□ 0.85
RNF38-208ENST00000488058 ZNF416Q9BWM5 594 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 OR2H1Q9GZK4 316 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 SYT4Q9H2B2 425 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 POLE4Q9NR33 117 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 NF1P21359 2839 aa20.38■□□□□ 0.85
RNF38-208ENST00000488058 CHD3Q12873 2000 aaKnown RBP20.37■□□□□ 0.85
RNF38-208ENST00000488058 ZFHX3Q15911 3703 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 C5orf49A4QMS7 147 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 SLC16A7O60669 478 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 PPP1R3DO95685 299 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 CTLA4P16410 223 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 NR4A2P43354 598 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 UCP2P55851 309 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 SELENOVP59797 346 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 PCBD1P61457 104 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 ENDOGQ14249 297 aaKnown RBP20.37■□□□□ 0.85
RNF38-208ENST00000488058 NKPD1Q17RQ9 610 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 UGT2A3Q6UWM9 527 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 DHFR2Q86XF0 187 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 ALDH16A1Q8IZ83 802 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 ARHGAP24Q8N264 748 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 OR1J1Q8NGS3 322 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 SYNPRQ8TBG9 265 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 C11orf40Q8WZ69 217 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 BCL2L14Q9BZR8 327 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 WNT5BQ9H1J7 359 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 MS4A5Q9H3V2 200 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 TIMM10BQ9Y5J6 103 aa20.37■□□□□ 0.85
RNF38-208ENST00000488058 FN1P02751 2386 aaKnown RBP20.36■□□□□ 0.85
RNF38-208ENST00000488058 C12orf71A8MTZ7 269 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 VWC2LB2RUY7 222 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 IMPA2O14732 288 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 AHCYL1O43865 530 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 CLPTM1O96005 669 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 SCG5P05408 212 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 T-ENOLP0DO92 83 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 IFNGR2P38484 337 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 ZNF774Q6NX45 483 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 UBASH3BQ8TF42 649 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 POM121L2Q96KW2 1035 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 ERMAPQ96PL5 475 aaPredicted RBP20.36■□□□□ 0.85
RNF38-208ENST00000488058 OR52D1Q9H346 318 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 TAAR3PQ9P1P4 343 aa20.36■□□□□ 0.85
RNF38-208ENST00000488058 EIF3KQ9UBQ5 218 aaKnown RBP20.36■□□□□ 0.85
RNF38-208ENST00000488058 HIVEP2P31629 2446 aa20.35■□□□□ 0.85
RNF38-208ENST00000488058 LOC100509620A0A075B734 347 aa20.35■□□□□ 0.85
RNF38-208ENST00000488058 KHDRBS3O75525 346 aaKnown RBP20.35■□□□□ 0.85
RNF38-208ENST00000488058 STAMBPO95630 424 aa20.35■□□□□ 0.85
RNF38-208ENST00000488058 NAT2P11245 290 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms