RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CENPHQ9H3R5 247 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 C1orf109Q9NX04 203 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 NOP53Q9NZM5 478 aaKnown RBP4.72□□□□□ -1.65
COL4A3-206ENST00000487633 ZDHHC8Q9ULC8 765 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 STK38LQ9Y2H1 464 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 FAM96BQ9Y3D0 163 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 FIS1Q9Y3D6 152 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 GPR45Q9Y5Y3 372 aa4.72□□□□□ -1.65
COL4A3-206ENST00000487633 A0A087WUJ7 227 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 RNF103-CHMP3A0A140T963 221 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 MEIOCA2RUB1 952 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 CDHR4A6H8M9 788 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 F5H5P2 479 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PHYHO14832 338 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 NPFFO15130 113 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 CFLARO15519 480 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 TIMM8AO60220 97 aaPredicted RBP4.71□□□□□ -1.66
COL4A3-206ENST00000487633 ZFPL1O95159 310 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 AHSA1O95433 338 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PF4P02776 101 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 BGLAPP02818 100 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 TFF1P04155 84 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 HLA-DPB1P04440 258 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 LINC00032P0C843 101 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PF4V1P10720 104 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 STOMP27105 288 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 MAPK1P28482 360 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 MAGEA4P43358 317 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 CSNK1A1P48729 337 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 LUMP51884 338 aaPredicted RBP4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PRKAA2P54646 552 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 BIDP55957 195 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 BLCAPP62952 87 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PSG4Q00888 419 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 MPPED2Q15777 294 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 GPAT3Q53EU6 434 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 CLEC12AQ5QGZ9 265 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 METTL11BQ5VVY1 283 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PRAMEF6Q5VXH4 476 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 OTPQ5XKR4 325 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 OR4F3Q6IEY1 312 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 LHFPL2Q6ZUX7 228 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 BTN2A1Q7KYR7 527 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 ANKRD46Q86W74 232 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 UEVLDQ8IX04 471 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 Q8N2B8 174 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 SLC35F6Q8N357 371 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 RBM15BQ8NDT2 890 aaKnown RBP4.71□□□□□ -1.66
COL4A3-206ENST00000487633 OR4C13Q8NGP0 309 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 DCAKDQ8WVC6 231 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 CMBLQ96DG6 245 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 L3HYPDHQ96EM0 354 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 SLC41A3Q96GZ6 507 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 PLEKHA8Q96JA3 519 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 CLPTM1LQ96KA5 538 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 MEGF10Q96KG7 1140 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 LRR1Q96L50 414 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 DUX3Q96PT4 197 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 ZNF347Q96SE7 839 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 ZNF607Q96SK3 696 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 WFDC6Q9BQY6 131 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 WNT5BQ9H1J7 359 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 GLTPQ9NZD2 209 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 IL19Q9UHD0 177 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 EMCNQ9ULC0 261 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 TMCO1Q9UM00 188 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 JRKLQ9Y4A0 524 aa4.71□□□□□ -1.66
COL4A3-206ENST00000487633 DYNC1H1Q14204 4646 aaKnown RBP4.7□□□□□ -1.66
COL4A3-206ENST00000487633 LOC102725191A0A1B0GVB3 256 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 C11orf98E9PRG8 122 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 G3V2L1 256 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 AIM2O14862 343 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 NPHS1O60500 1241 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 SCG5P05408 212 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 SNRNP70P08621 437 aaKnown RBP4.7□□□□□ -1.66
COL4A3-206ENST00000487633 QDPRP09417 244 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 TNFRSF1AP19438 455 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 HTR2AP28223 471 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 APLNRP35414 380 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 MAP2K6P52564 334 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 PKNOX1P55347 436 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 ERVFRD-1P60508 538 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 GNG11P61952 73 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 ERVK-25P63136 954 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 ILF2Q12905 390 aaKnown RBP4.7□□□□□ -1.66
COL4A3-206ENST00000487633 MAB21L1Q13394 359 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 MOGQ16653 247 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 RPS26P11Q5JNZ5 115 aaPredicted RBP4.7□□□□□ -1.66
COL4A3-206ENST00000487633 WBP2NLQ6ICG8 309 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 DCDC5Q6ZRR9 648 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 H1FNTQ75WM6 255 aaPredicted RBP4.7□□□□□ -1.66
COL4A3-206ENST00000487633 SLC16A14Q7RTX9 510 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 TMEM219Q86XT9 240 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 RIMKLAQ8IXN7 391 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 RPP25LQ8N5L8 163 aaKnown RBP4.7□□□□□ -1.66
COL4A3-206ENST00000487633 CCNYL1Q8N7R7 359 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 BEND2Q8NDZ0 799 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 OR5AU1Q8NGC0 362 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 MIPOL1Q8TD10 442 aa4.7□□□□□ -1.66
COL4A3-206ENST00000487633 STK35Q8TDR2 534 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms