RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FAM166AQ6J272 317 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 ZNF574Q6ZN55 896 aaPredicted RBP23.47■■□□□ 1.35
HLA-C-208ENST00000487245 CCDC28AQ8IWP9 274 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 APCDD1LQ8NCL9 501 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 OR51A4Q8NGJ6 313 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 CEP76Q8TAP6 659 aa23.47■■□□□ 1.35
HLA-C-208ENST00000487245 SLC17A2O00624 439 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 CD37P11049 281 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 EPHA8P29322 1005 aaPredicted RBP23.46■■□□□ 1.35
HLA-C-208ENST00000487245 CRABP1P29762 137 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 DLX5P56178 289 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 ZP4Q12836 540 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 EXOSC2Q13868 293 aaKnown RBP23.46■■□□□ 1.35
HLA-C-208ENST00000487245 MEP1BQ16820 701 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 LRRC69Q6ZNQ3 347 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 FTMTQ8N4E7 242 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 MEIOBQ8N635 442 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 PIGKQ92643 395 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 C8orf44Q96CB5 159 aa23.46■■□□□ 1.35
HLA-C-208ENST00000487245 TNRC18O15417 2968 aaPredicted RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 IGHV3-20A0A0C4DH32 117 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 A6NIZ1 184 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 SLC16A7O60669 478 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 GPANK1O95872 356 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 APOBEC1P41238 236 aaKnown RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 RPS27P42677 84 aaKnown RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 RAP1BP61224 184 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 RAP1AP62834 184 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 PLA2G7Q13093 441 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 RBMS2Q15434 407 aaKnown RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 KCTD18Q6PI47 426 aaPredicted RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 TSEN15Q8WW01 171 aaKnown RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 IER2Q9BTL4 223 aa23.45■■□□□ 1.35
HLA-C-208ENST00000487245 MRPL22Q9NWU5 206 aaKnown RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 ATXN7L1Q9ULK2 861 aaPredicted RBP23.45■■□□□ 1.35
HLA-C-208ENST00000487245 FER1L5A0AVI2 2057 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 CIB4A0PJX0 185 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 SLC22A23A1A5C7 686 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 ONECUT2O95948 504 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 PLGP00747 810 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-208ENST00000487245 DCDP81605 110 aaKnown RBP23.45■■□□□ 1.34
HLA-C-208ENST00000487245 INSM1Q01101 510 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-208ENST00000487245 RAB11BQ15907 218 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 LYSMD4Q5XG99 296 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 MAMSTRQ6ZN01 415 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 SLC36A1Q7Z2H8 476 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 KANSL1Q7Z3B3 1105 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 ZNF454Q8N9F8 522 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 OR5L2Q8NGL0 311 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 OR8K3Q8NH51 312 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 ZNF587Q96SQ5 575 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-208ENST00000487245 RARRES3Q9UL19 164 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 SIT1Q9Y3P8 196 aa23.45■■□□□ 1.34
HLA-C-208ENST00000487245 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 PLSCR5A0PG75 271 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 H0YC42 278 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 CRYZL1O95825 349 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 ANXA7P20073 488 aaKnown RBP23.44■■□□□ 1.34
HLA-C-208ENST00000487245 MFSD8Q8NHS3 518 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 RBP7Q96R05 134 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 OR6C1Q96RD1 312 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 ULBP3Q9BZM4 244 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 GLTPQ9NZD2 209 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 ZNF69Q9UC07 566 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 ASXL3Q9C0F0 2248 aa23.44■■□□□ 1.34
HLA-C-208ENST00000487245 LOC100289279A0A1B0GTE1 492 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 CPED1A4D0V7 1026 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 FTCDNL1E5RQL4 147 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 WISP1O95388 367 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 SSTR2P30874 369 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 MAP2K6P52564 334 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 EMP2P54851 167 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 PSMA6P60900 246 aaKnown RBP23.43■■□□□ 1.34
HLA-C-208ENST00000487245 TSPAN5P62079 268 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 GRK1Q15835 563 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 PCGF3Q3KNV8 242 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 TMPRSS9Q7Z410 1059 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 OR51D1Q8NGF3 324 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 DNAJA3Q96EY1 480 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 OR11A1Q9GZK7 315 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 ING1Q9UK53 422 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-208ENST00000487245 SCRG1O75711 98 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 DCNP07585 359 aaKnown RBP23.43■■□□□ 1.34
HLA-C-208ENST00000487245 FSTP19883 344 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 POU3F4P49335 361 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 FBXW4P57775 412 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 FAAP20Q6NZ36 180 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 OR4C16Q8NGL9 310 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 OR6N1Q8NGY5 312 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 FAM3DQ96BQ1 224 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 CA10Q9NS85 328 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 CDV3Q9UKY7 258 aaKnown RBP23.43■■□□□ 1.34
HLA-C-208ENST00000487245 MAB21L2Q9Y586 359 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 DNAH14Q0VDD8 3507 aa23.43■■□□□ 1.34
HLA-C-208ENST00000487245 NPIPB13A6NJU9 1138 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 NPIPB4C9JG80 1138 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 M0R233 179 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 ZNF208O43345 1280 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 ARPC4P59998 168 aa23.42■■□□□ 1.34
HLA-C-208ENST00000487245 CSRP2Q16527 193 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms