RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SOCS2O14508 198 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 SMAD7O15105 426 aaKnown RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 TMCC2O75069 709 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 PPP1R3DO95685 299 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 RAB36O95755 333 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 CD14P08571 375 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 MMP7P09237 267 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 OR4A8P0C604 315 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 CCL2P13500 99 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF35P13682 527 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ITGA2P17301 1181 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 APOBEC3AP31941 199 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 THBS4P35443 961 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 SERPINF1P36955 418 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 MAGEA2P43356 314 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ERFP50548 548 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF84P51523 738 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 RAB1AP62820 205 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 MRPS34P82930 218 aaKnown RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ID3Q02535 119 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 SNTB2Q13425 540 aaKnown RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 TNK1Q13470 666 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 KRR1Q13601 381 aaKnown RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 TRIM25Q14258 630 aaKnown RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 TAF11Q15544 211 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ETFDHQ16134 617 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF544Q6NX49 715 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 PGBD2Q6P3X8 592 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 PRSS57Q6UWY2 283 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 PTCHD4Q6ZW05 846 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 Q71RC1 249 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 HDDC2Q7Z4H3 204 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 DHFR2Q86XF0 187 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 CCDC36Q8IYA8 594 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 CDK20Q8IZL9 346 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ARHGAP24Q8N264 748 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ARIH2OSQ8N7S6 290 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 MAPK1IP1LQ8NDC0 245 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 NUP37Q8NFH4 326 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 OR9Q2Q8NGE9 314 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 OR4C15Q8NGM1 316 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 FANK1Q8TC84 345 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 MCUR1Q96AQ8 359 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ASB9Q96DX5 294 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 FBXO17Q96EF6 278 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 COX4I2Q96KJ9 171 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF570Q96NI8 536 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 BTBD10Q9BSF8 475 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ALG12Q9BV10 488 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 C1orf21Q9H246 121 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 DENND2DQ9H6A0 471 aaPredicted RBP6.18□□□□□ -1.42
UBE4B-209ENST00000487244 FZR1Q9UM11 496 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 IER3IP1Q9Y5U9 82 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 LYVE1Q9Y5Y7 322 aa6.18□□□□□ -1.42
UBE4B-209ENST00000487244 ZFHX3Q15911 3703 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 A0A1W2PPL8 197 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 TMEM129A0AVI4 362 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 SLC22A23A1A5C7 686 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 PRSS37A4D1T9 235 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 A6NIZ1 184 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 H7C417 338 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 GYG2O15488 501 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 SSX4O60224 188 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 MGRN1O60291 552 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 OR10H3O60404 316 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 FBXO24O75426 580 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 UBL3O95164 117 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 NDUFB2O95178 105 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 MPZL1O95297 269 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 FARS2O95363 451 aaKnown RBP6.17□□□□□ -1.42
UBE4B-209ENST00000487244 GPANK1O95872 356 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 SERPINA5P05154 406 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 IGFBP1P08833 259 aaPredicted RBP6.17□□□□□ -1.42
UBE4B-209ENST00000487244 INHBBP09529 407 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 CTLA4P16410 223 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF32P17041 273 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 NR4A1P22736 598 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 FPR3P25089 353 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 APEX1P27695 318 aaKnown RBP6.17□□□□□ -1.42
UBE4B-209ENST00000487244 LAP3P28838 519 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 CDKN2AP42771 156 aaKnown RBP6.17□□□□□ -1.42
UBE4B-209ENST00000487244 GSSP48637 474 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 RAP1BP61224 184 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 ERVS71-1P61550 626 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 RAP1AP62834 184 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 DAG1Q14118 895 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 ENDOGQ14249 297 aaKnown RBP6.17□□□□□ -1.42
UBE4B-209ENST00000487244 SGCAQ16586 387 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 CLEC12BQ2HXU8 276 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 ANKDD1AQ495B1 522 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 MTX3Q5HYI7 312 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 PABPC1L2AQ5JQF8 200 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 FAM205BPQ63HN1 556 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF770Q6IQ21 691 aaPredicted RBP6.17□□□□□ -1.42
UBE4B-209ENST00000487244 SMARCD3Q6STE5 483 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 UGT2A3Q6UWM9 527 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 ZNF620Q6ZNG0 422 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 DNM1P46Q6ZS02 220 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 FOXL2NBQ6ZUU3 175 aa6.17□□□□□ -1.42
UBE4B-209ENST00000487244 SLC16A14Q7RTX9 510 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms