RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 ENSAO43768 121 aaKnown RBP15.05■□□□□ -0
COL7A1-210ENST00000487017 RFX2P48378 723 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 OR10K2Q6IF99 312 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 BRICD5Q6PL45 260 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 USP51Q70EK9 711 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 CALHM3Q86XJ0 350 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 ZFPM2Q8WW38 1151 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 YIPF5Q969M3 257 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 MRPL38Q96DV4 380 aaKnown RBP15.05■□□□□ -0
COL7A1-210ENST00000487017 ZIC2O95409 532 aaPredicted RBP15.05■□□□□ -0
COL7A1-210ENST00000487017 DEFA6Q01524 100 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 DOC2BQ14184 412 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 ATPAF1Q5TC12 328 aaPredicted RBP15.05■□□□□ -0
COL7A1-210ENST00000487017 FJX1Q86VR8 437 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 GJC3Q8NFK1 279 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 NRSN2Q9GZP1 204 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 SMCO4Q9NRQ5 59 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 PIGLQ9Y2B2 252 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 PRAMEF25A6NGN4 478 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 KDM8Q8N371 416 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 DMBX1Q8NFW5 382 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 GFOD1Q9NXC2 390 aa15.05■□□□□ -0
COL7A1-210ENST00000487017 AGAP14A8MT82 685 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 TPBGQ13641 420 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 CSF3RQ99062 836 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 OR11A1Q9GZK7 315 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 SLAMF7Q9NQ25 335 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 MYOTQ9UBF9 498 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 KIAA1551Q9HCM1 1747 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 LOC107986453A0A1B0GWG9 222 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 SOX18P35713 384 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 CARD18P57730 90 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 OR10A3P58181 314 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 ELAVL1Q15717 326 aaKnown RBP15.04■□□□□ -0
COL7A1-210ENST00000487017 SCN7AQ01118 1682 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 PTAFRP25105 342 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 RAD52P43351 418 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 C2orf76Q3KRA6 126 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 RDH10Q8IZV5 341 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 LGI3Q8N145 548 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 HSD17B11Q8NBQ5 300 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 SMIM19Q96E16 107 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 SRRQ9GZT4 340 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 ZNF355PQ9NSJ1 428 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 BCORQ6W2J9 1755 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 A0A1B0GX78 115 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 FOLR1P15328 257 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 APOBEC1P41238 236 aaKnown RBP15.04■□□□□ -0
COL7A1-210ENST00000487017 DOK3Q7L591 496 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 CAMKMTQ7Z624 323 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 HRASLSQ9HDD0 168 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 PISDQ9UG56 409 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 PCDHGA5Q9Y5G8 931 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 CROCCQ5TZA2 2017 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 ARAP2Q8WZ64 1704 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 ASPDHA6ND91 283 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 M0R082 166 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 HABP2Q14520 560 aaPredicted RBP15.04■□□□□ -0
COL7A1-210ENST00000487017 OR13C5Q8NGS8 318 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 TAF9BQ9HBM6 251 aa15.04■□□□□ -0
COL7A1-210ENST00000487017 RREB1Q92766 1687 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 PRRT4C9JH25 899 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 OR2F2O95006 317 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 AKR7A3O95154 331 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 SERPINF1P36955 418 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 OR2F1Q13607 317 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 NKG7Q16617 165 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 Q6ZNB5 142 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 CMTM4Q8IZR5 234 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 GABRG1Q8N1C3 465 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 ASB16Q96NS5 453 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 RNF32Q9H0A6 362 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 CD46P15529 392 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 LHX6Q9UPM6 363 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 LINC01553A4QN01 128 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 G3V3Y1 287 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 TUSC2O75896 110 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 BCKDHBP21953 392 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 BAK1Q16611 211 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 SLC39A9Q9NUM3 307 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 ZNF749O43361 778 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 CDK5R1Q15078 307 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 RHOUQ7L0Q8 258 aa15.03■□□□□ -0
COL7A1-210ENST00000487017 ALOX12BO75342 701 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 ABHD16AO95870 558 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 PEX11BO96011 259 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 RAB39BQ96DA2 213 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 BANF2Q9H503 90 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 TMEFF2Q9UIK5 374 aaPredicted RBP15.02■□□□□ -0
COL7A1-210ENST00000487017 ZNF346Q9UL40 294 aaKnown RBP15.02■□□□□ -0
COL7A1-210ENST00000487017 IFITM5A6NNB3 132 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 ZNF814B7Z6K7 855 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 UPK1AO00322 258 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 GLSO94925 669 aaPredicted RBP15.02■□□□□ -0
COL7A1-210ENST00000487017 PHLDA2Q53GA4 152 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 OR1M1Q8NGA1 313 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 UHRF2Q96PU4 802 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 ATF6BQ99941 703 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 NIPSNAP3BQ9BS92 247 aa15.02■□□□□ -0
COL7A1-210ENST00000487017 B3GALT5Q9Y2C3 310 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms