RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 LIPEQ05469 1076 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 PON3Q15166 354 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 THEM4Q5T1C6 240 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 ANXA8L1Q5VT79 327 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 LYPD2Q6UXB3 125 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 TIFABQ6ZNK6 161 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 TEX43Q6ZNM6 134 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 HDDC2Q7Z4H3 204 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 CMC1Q7Z7K0 106 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 LINC01551Q86U37 167 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 BIVMQ86UB2 503 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 GABRG1Q8N1C3 465 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 OR4S2Q8NH73 311 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 GIMAP1Q8WWP7 306 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 OR5B12Q96R08 314 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 SDHCQ99643 169 aaPredicted RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 C20orf96Q9NUD7 363 aaPredicted RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 CCDC59Q9P031 241 aaKnown RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 RABL2AQ9UBK7 228 aaPredicted RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 ZNF223Q9UK11 482 aaPredicted RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 MRPS18BQ9Y676 258 aaKnown RBP2.98□□□□□ -1.93
SMC4-218ENST00000486711 AKNAQ7Z591 1439 aa2.98□□□□□ -1.93
SMC4-218ENST00000486711 MAPK8IP3Q9UPT6 1336 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 TRBV9A0A0B4J1U6 114 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 SERTM2A0A1B0GWG4 89 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 PLAC8L1A1L4L8 177 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 DNAJB6O75190 326 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 SRP72O76094 671 aaKnown RBP2.97□□□□□ -1.93
SMC4-218ENST00000486711 IGLV2-23P01705 113 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 ERCC1P07992 297 aaPredicted RBP2.97□□□□□ -1.93
SMC4-218ENST00000486711 F2RP25116 425 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 DCKP27707 260 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 MRPL19P49406 292 aaKnown RBP2.97□□□□□ -1.93
SMC4-218ENST00000486711 SLC25A11Q02978 314 aaKnown RBP2.97□□□□□ -1.93
SMC4-218ENST00000486711 GBE1Q04446 702 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 SELENBP1Q13228 472 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 GINS1Q14691 196 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 HES5Q5TA89 166 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 TSPO2Q5TGU0 170 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 IGFL2Q6UWQ7 119 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 PCP2Q8IVA1 136 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 CMTM1Q8IZ96 169 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 ZNF786Q8N393 782 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 OR2A1Q8NGT9 310 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 MARCH1Q8TCQ1 289 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 CAPSLQ8WWF8 208 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 STARD8Q92502 1023 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 CREB3L1Q96BA8 519 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 ECHDC3Q96DC8 303 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 CEP170P1Q96L14 293 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 PARP12Q9H0J9 701 aaKnown RBP2.97□□□□□ -1.93
SMC4-218ENST00000486711 TMEM165Q9HC07 324 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 FAM49BQ9NUQ9 324 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 PTTG3PQ9NZH4 202 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 OR12D3Q9UGF7 316 aa2.97□□□□□ -1.93
SMC4-218ENST00000486711 LRRIQ4A6NIV6 560 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 H7C0C1 242 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 CD5LO43866 347 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 CHST1O43916 411 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 CACNG3O60359 315 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 FKBP6O75344 327 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 FGF4P08620 206 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 SFTPCP11686 197 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 CCNB1P14635 433 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 RAB3BP20337 219 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 STOMP27105 288 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 MAS1LP35410 378 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 LONP1P36776 959 aaKnown RBP2.96□□□□□ -1.94
SMC4-218ENST00000486711 CSNK1EP49674 416 aaKnown RBP2.96□□□□□ -1.94
SMC4-218ENST00000486711 RAB9AP51151 201 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 MECOMQ03112 1051 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 MXD1Q05195 221 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 EIF4EBP2Q13542 120 aaPredicted RBP2.96□□□□□ -1.94
SMC4-218ENST00000486711 PSMD5Q16401 504 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 PTPN20Q4JDL3 420 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 AGBL2Q5U5Z8 902 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 TMEM53Q6P2H8 277 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 TMEM150AQ86TG1 271 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 MMAAQ8IVH4 418 aaKnown RBP2.96□□□□□ -1.94
SMC4-218ENST00000486711 ENTHD1Q8IYW4 607 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 PRELID2Q8N945 189 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 Q8N9L7 120 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 OR10G4Q8NGN3 311 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 LYPD6BQ8NI32 183 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 C8orf44Q96CB5 159 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 BMFQ96LC9 184 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 PRRC1Q96M27 445 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 XPO6Q96QU8 1125 aaKnown RBP2.96□□□□□ -1.94
SMC4-218ENST00000486711 BPIFA3Q9BQP9 254 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 AUNIPQ9H7T9 357 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 CCNB1IP1Q9NPC3 277 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 ISYNA1Q9NPH2 558 aa2.96□□□□□ -1.94
SMC4-218ENST00000486711 GTF3C1Q12789 2109 aa2.95□□□□□ -1.94
SMC4-218ENST00000486711 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.95□□□□□ -1.94
SMC4-218ENST00000486711 C11orf94C9JXX5 98 aa2.95□□□□□ -1.94
SMC4-218ENST00000486711 INS-IGF2F8WCM5 200 aa2.95□□□□□ -1.94
SMC4-218ENST00000486711 EIF4E2O60573 245 aaKnown RBP2.95□□□□□ -1.94
SMC4-218ENST00000486711 SPAG7O75391 227 aa2.95□□□□□ -1.94
SMC4-218ENST00000486711 GABARAPO95166 117 aa2.95□□□□□ -1.94
SMC4-218ENST00000486711 PRB2P02812 416 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms