RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MSGN1A6NI15 193 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 MFNGO00587 321 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 INHAP05111 366 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 DAOP14920 347 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 NME2P22392 152 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 CDKN2AP42771 156 aaKnown RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF124Q15973 351 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF425Q6IV72 752 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF585AQ6P3V2 769 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 LEG1Q6P5S2 330 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 DPY19L2P2Q6ZN68 376 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 SLC16A9Q7RTY1 509 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 PRSS35Q8N3Z0 413 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 ADAD2Q8NCV1 583 aaKnown RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 GPR148Q8TDV2 347 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 GTF3AQ92664 365 aaKnown RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF775Q96BV0 537 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 SAT2Q96F10 170 aaPredicted RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 RBM18Q96H35 190 aaKnown RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 IGSF21Q96ID5 467 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 IP6K3Q96PC2 410 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 SLC46A2Q9BY10 475 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 TREM2Q9NZC2 230 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 KLK13Q9UKR3 277 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 IKZF2Q9UKS7 526 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 SLC27A6Q9Y2P4 619 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 LAMA3Q16787 3333 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 RHPN2P1A8MT19 583 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SLC17A2O00624 439 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 P2RX6O15547 441 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 MBTPS2O43462 519 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ERCC1P07992 297 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 RHOP08100 348 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SNRNP70P08621 437 aaKnown RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 BTF3P20290 206 aaKnown RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 RAB5AP20339 215 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 VAMP1P23763 118 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SERPINF1P36955 418 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 PMELP40967 661 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ACAA2P42765 397 aaKnown RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 OR2B8PP59922 312 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 RAB2AP61019 212 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ADAM5Q6NVV9 412 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 COX18Q8N8Q8 333 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 FAM174AQ8TBP5 190 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ADAMTS17Q8TE56 1095 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 COMMD4Q9H0A8 199 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SLC17A5Q9NRA2 495 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 MRPS33Q9Y291 106 aaKnown RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SCN5AQ14524 2016 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SNRNP200O75643 2136 aaKnown RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 C7orf77A4D0Y5 90 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ELOA3DA6NLF2 546 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 DNAJB6O75190 326 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 FBXO24O75426 580 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SLC34A2O95436 690 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 CD2P06729 351 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 AKR1C4P17516 323 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 MAOAP21397 527 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 CFPP27918 469 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 RPS27P42677 84 aaKnown RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ID4P47928 161 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SLC6A9P48067 706 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 FLT3LGP49771 235 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 EMDP50402 254 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ID2Q02363 134 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 DMWDQ09019 674 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 MLF2Q15773 248 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ELOA3BQ3SY89 546 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 MOGAT2Q3SYC2 334 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 FAM166AQ6J272 317 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 CDPF1Q6NVV7 123 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 LINC00114Q6XXX2 140 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 MTSS1LQ765P7 747 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 BHLHE23Q8NDY6 225 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ELOA3Q8NG57 546 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SECTM1Q8WVN6 248 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 ROBO4Q8WZ75 1007 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SUSD6Q92537 303 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 SLC41A2Q96JW4 573 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 TOLLIPQ9H0E2 274 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 UFSP2Q9NUQ7 469 aa9.62□□□□□ -0.87
CCDC171-208ENST00000486641 FITM1A5D6W6 292 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 PRAMEF26H0Y7S4 382 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 EFSO43281 561 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 DOK2O60496 412 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 MED6O75586 246 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF432O94892 652 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 GLP1RP43220 463 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 GSK3AP49840 483 aa9.61□□□□□ -0.87
CCDC171-208ENST00000486641 EIF2B1Q14232 305 aaKnown RBP9.61□□□□□ -0.87
CCDC171-208ENST00000486641 KLHL26Q53HC5 615 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms