RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 KCNK9Q9NPC2 374 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 YAE1D1Q9NRH1 226 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 THUMPD1Q9NXG2 353 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 MYEF2Q9P2K5 600 aaKnown RBP6.02□□□□□ -1.45
HDAC3-209ENST00000486618 RNF14Q9UBS8 474 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 PHF11Q9UIL8 331 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 NUP50Q9UKX7 468 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 OARD1Q9Y530 152 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 PCDHGB1Q9Y5G3 927 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 FKBP7Q9Y680 259 aa6.02□□□□□ -1.45
HDAC3-209ENST00000486618 EXPH5Q8NEV8 1989 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 A0A1W2PNV4 684 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM233B4DJY2 109 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TRIM77I1YAP6 450 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 PHF1O43189 567 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CD5LO43866 347 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TNFSF13O75888 250 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CCNKO75909 580 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 SOX30O94993 753 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 SCELO95171 688 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 GPR75O95800 540 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 PPP3CBP16298 524 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF37AP17032 561 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 HK1P19367 917 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 GSTM3P21266 225 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 PAICSP22234 425 aaKnown RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CRABP1P29762 137 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 MAS1LP35410 378 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 UGT2B10P36537 528 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 GDF5P43026 501 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 SSR2P43308 183 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 MAGEA3P43357 314 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TAS2R60P59551 318 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 FLI1Q01543 452 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 SLAMF1Q13291 335 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 FGFBP1Q14512 234 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 GUK1Q16774 197 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CLEC12BQ2HXU8 276 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 SPANXN3Q5MJ09 141 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 DDI2Q5TDH0 399 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 LGSNQ5TDP6 509 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM81Q6P7N7 255 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM64Q6YI46 380 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF793Q6ZN11 406 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM182Q6ZP80 229 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 DGAT2L6Q6ZPD8 337 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 GPR141Q7Z602 305 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 DPPA2Q7Z7J5 298 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 LHFPL4Q7Z7J7 247 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CATSPERDQ86XM0 798 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 FAM89BQ8N5H3 189 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF611Q8N823 705 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CNEP1R1Q8N9A8 125 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CYB561A3Q8NBI2 242 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 OR14L1PQ8NHC6 308 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 HOXB13Q92826 284 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 EMG1Q92979 244 aaKnown RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 SLCO4A1Q96BD0 722 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 WDR34Q96EX3 536 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 TRMT61AQ96FX7 289 aaKnown RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CERS2Q96G23 380 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 ZC3HAV1LQ96H79 300 aaKnown RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 C4orf36Q96KX1 117 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 MS4A8Q9BY19 250 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 REG4Q9BYZ8 158 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 AMBRA1Q9C0C7 1298 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 NUAK2Q9H093 628 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 PLK3Q9H4B4 646 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 NOL11Q9H8H0 719 aaKnown RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 WDR41Q9HAD4 459 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 MYOZ1Q9NP98 299 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 USE1Q9NZ43 259 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 PTTG2Q9NZH5 202 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CLCF1Q9UBD9 225 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 EIF3KQ9UBQ5 218 aaKnown RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF490Q9ULM2 529 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-209ENST00000486618 POFUT2Q9Y2G5 429 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 ALPK2Q86TB3 2170 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 CR1P17927 2039 aa6.01□□□□□ -1.45
HDAC3-209ENST00000486618 PRR14LQ5THK1 2151 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 A0A087X1B8 175 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 A0A1B0GW15 77 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 NPEPPSL1A6NEC2 478 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 OR2AT4A6NND4 320 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 SERPINE3A8MV23 424 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 ATP6V1G2-DDX39BF2Z307 99 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 F8W036 122 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 SSX4O60224 188 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 STK16O75716 305 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 RSL1D1O76021 490 aaKnown RBP6□□□□□ -1.45
HDAC3-209ENST00000486618 PRSS23O95084 383 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 OR6A2O95222 327 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 BCL10O95999 233 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 MT-ND1P03886 318 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 FAM157CP0CG43 387 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 TBXA2RP21731 343 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 ACKR3P25106 362 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 DPP4P27487 766 aa6□□□□□ -1.45
HDAC3-209ENST00000486618 PRDX6P30041 224 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms