RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 OR8J3Q8NGG0 315 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 CCL17Q92583 94 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 ELMOD3Q96FG2 381 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF583Q96ND8 569 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 SH3GL1Q99961 368 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 PLA2G12AQ9BZM1 189 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 OR2J1Q9GZK6 312 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 POLR2J2Q9GZM3 115 aaKnown RBP16.34■□□□□ 0.21
COL27A1-205ENST00000485397 POLR2J3Q9H1A7 115 aaKnown RBP16.34■□□□□ 0.21
COL27A1-205ENST00000485397 TXNIPQ9H3M7 391 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 SMURF2Q9HAU4 748 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 EIF3KQ9UBQ5 218 aaKnown RBP16.34■□□□□ 0.21
COL27A1-205ENST00000485397 A0A0G2JMP0 313 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 A0A0X1KG70 313 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 ZSCAN5BA6NJL1 495 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 HMGB1P1B2RPK0 211 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-205ENST00000485397 ADRA2CP18825 462 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 FUT4P22083 530 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 LAP3P28838 519 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 HILS1P60008 231 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 HNRNPA0Q13151 305 aaKnown RBP16.33■□□□□ 0.2
COL27A1-205ENST00000485397 ALG10Q5BKT4 473 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 FAM209AQ5JX71 171 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 FAM27BQ5VT28 67 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 RFPL4BQ6ZWI9 263 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 PEG10Q86TG7 708 aaKnown RBP16.33■□□□□ 0.2
COL27A1-205ENST00000485397 OR4M2Q8NGB6 313 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 KLF14Q8TD94 323 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-205ENST00000485397 RAB1CQ92928 201 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 TIMD4Q96H15 378 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 SIKE1Q9BRV8 207 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 TMEM120AQ9BXJ8 343 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 WNT5BQ9H1J7 359 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 HIF3AQ9Y2N7 669 aa16.33■□□□□ 0.2
COL27A1-205ENST00000485397 NPIPB13A6NJU9 1138 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 NPIPB4C9JG80 1138 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 NGFP01138 241 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 THRBP10828 461 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 IFI30P13284 250 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 LRRC23Q53EV4 343 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-205ENST00000485397 CYBRD1Q53TN4 286 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 SPRNQ5BIV9 151 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 MBNL2Q5VZF2 373 aaKnown RBP16.32■□□□□ 0.2
COL27A1-205ENST00000485397 USP43Q70EL4 1123 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 C1QL2Q7Z5L3 287 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 IGFN1Q86VF2 1251 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 TEX29Q8N6K0 151 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 ABHD4Q8TB40 342 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 C10orf82Q8WW14 230 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 ALG12Q9BV10 488 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 OR2H1Q9GZK4 316 aa16.32■□□□□ 0.2
COL27A1-205ENST00000485397 WNK2Q9Y3S1 2297 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 MRASO14807 208 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 UBOX5O94941 541 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 IFNA14P01570 189 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 KDELR2P33947 212 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 ARFIP2P53365 341 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 CTXN1P60606 82 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 RPL27P61353 136 aaKnown RBP16.31■□□□□ 0.2
COL27A1-205ENST00000485397 PPP1CBP62140 327 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 SF3A3Q12874 501 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■■■■■ 28.8
COL27A1-205ENST00000485397 DCAF12L2Q5VW00 463 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 ZNF774Q6NX45 483 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 ERICH5Q6P6B1 374 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 MICU2Q8IYU8 434 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 LRRC75AQ8NAA5 344 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 FAM216AQ8WUB2 273 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 GCDHQ92947 438 aaPredicted RBP16.31■□□□□ 0.2
COL27A1-205ENST00000485397 TPD52L3Q96J77 140 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 RBP7Q96R05 134 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 GAL3ST1Q99999 423 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 A4GNTQ9UNA3 340 aa16.31■□□□□ 0.2
COL27A1-205ENST00000485397 ARHGAP32A7KAX9 2087 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 PLSCR5A0PG75 271 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 TMEM89A2RUT3 159 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 ISPDA4D126 451 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 TRIM77I1YAP6 450 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 CST2P09228 141 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 NR2C1P13056 603 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 RBMXP38159 391 aaKnown RBP16.3■□□□□ 0.2
COL27A1-205ENST00000485397 YAP1P46937 504 aaKnown RBP16.3■□□□□ 0.2
COL27A1-205ENST00000485397 COMPP49747 757 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-205ENST00000485397 ST3GAL3Q11203 375 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 KLF10Q13118 480 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 TAF11Q15544 211 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 ALDH16A1Q8IZ83 802 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 GEMIN6Q8WXD5 167 aaKnown RBP16.3■□□□□ 0.2
COL27A1-205ENST00000485397 BPIFA2Q96DR5 249 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 SLC6A7Q99884 636 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 MSL2Q9HCI7 577 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 DCAF16Q9NXF7 216 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 UBAP1Q9NZ09 502 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 KLHL21Q9UJP4 597 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 TIMM10BQ9Y5J6 103 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 DYSFO75923 2080 aa16.3■□□□□ 0.2
COL27A1-205ENST00000485397 A0A1W2PPL8 197 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 J3QLI3 93 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 IGHMP01871 453 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 SCG5P05408 212 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms