RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ZSWIM8A7E2V4 1837 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 ADGRL1O94910 1474 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 A0A0B4J2A0 478 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 NOL3O60936 208 aaKnown RBP1.19□□□□□ -2.22
VPS50-216ENST00000484954 SNNO75324 88 aaPredicted RBP1.19□□□□□ -2.22
VPS50-216ENST00000484954 C1orf105O95561 183 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 CD74P04233 296 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 CALM1P0DP23 149 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 CALM2P0DP24 149 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 CALM3P0DP25 149 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 PSMA5P28066 241 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 NUTF2P61970 127 aaKnown RBP1.19□□□□□ -2.22
VPS50-216ENST00000484954 IL24Q13007 206 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 GPM6BQ13491 265 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 CCDC152Q4G0S7 254 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 FBXW12Q6X9E4 464 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 ASCL5Q7RTU5 278 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 OAFQ86UD1 273 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 TMEM104Q8NE00 496 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 OR2G2Q8NGZ5 317 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 RLN3Q8WXF3 142 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 P2RX4Q99571 388 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 CRACR2AQ9BSW2 395 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 KLHL28Q9NXS3 571 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 UVRAGQ9P2Y5 699 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 SHPKQ9UHJ6 478 aa1.19□□□□□ -2.22
VPS50-216ENST00000484954 ISY1Q9ULR0 285 aaKnown RBP1.19□□□□□ -2.22
VPS50-216ENST00000484954 AHDC1Q5TGY3 1603 aaPredicted RBP1.18□□□□□ -2.22
VPS50-216ENST00000484954 IGHV3OR16-8A0A075B7F1 116 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 CCL21O00585 134 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 CXCL11O14625 94 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 NDC80O14777 642 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 MAGEB3O15480 346 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 SOCS1O15524 211 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 RAB3DO95716 219 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 ZNF735P0CB33 412 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 HNMTP50135 292 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 GDI2P50395 445 aaKnown RBP1.18□□□□□ -2.22
VPS50-216ENST00000484954 FLI1Q01543 452 aaPredicted RBP1.18□□□□□ -2.22
VPS50-216ENST00000484954 PRKCDQ05655 676 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 CHIT1Q13231 466 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 KCTD21Q4G0X4 260 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 PEX26Q7Z412 305 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 TMEM105Q8N8V8 129 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 OR9A2Q8NGT5 310 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 OR13G1Q8NGZ3 307 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 LILRB4Q8NHJ6 448 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 SLC41A3Q96GZ6 507 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 HSFY1Q96LI6 401 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 ZNF488Q96MN9 340 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 PSKH2Q96QS6 385 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 PANX2Q96RD6 677 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 TMEM59Q9BXS4 323 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 PARD6BQ9BYG5 372 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 OR52D1Q9H346 318 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 GORASP2Q9H8Y8 452 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 SAMSN1Q9NSI8 373 aaKnown RBP1.18□□□□□ -2.22
VPS50-216ENST00000484954 DDX19AQ9NUU7 478 aaKnown RBP1.18□□□□□ -2.22
VPS50-216ENST00000484954 CDH9Q9ULB4 789 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 CAMTA1Q9Y6Y1 1673 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 TSPOAP1O95153 1857 aa1.18□□□□□ -2.22
VPS50-216ENST00000484954 CACNA1DQ01668 2161 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 A0A1W2PPE3 182 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 A0A1W2PPV9 198 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 C5orf63A6NC05 138 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 ZNF878C9JN71 531 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 H0YCG3 227 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 H0YJW9 148 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 EIF3GO75821 320 aaKnown RBP eCLIP1.17□□□□□ -2.22
VPS50-216ENST00000484954 AIFM1O95831 613 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 GLRA2P23416 452 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 DCKP27707 260 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 GRIA1P42261 906 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 YAP1P46937 504 aaKnown RBP1.17□□□□□ -2.22
VPS50-216ENST00000484954 IFNAR2P48551 515 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 CCT3P49368 545 aaKnown RBP1.17□□□□□ -2.22
VPS50-216ENST00000484954 UGT2B15P54855 530 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 RBX1P62877 108 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 PDK3Q15120 406 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 PTPN20Q4JDL3 420 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 ATAD3BQ5T9A4 648 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 AP1ARQ63HQ0 302 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 Q6ZPB1 254 aaPredicted RBP1.17□□□□□ -2.22
VPS50-216ENST00000484954 LINC00336Q6ZUF6 198 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 PPP1R42Q7Z4L9 355 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 WDFY1Q8IWB7 410 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 LRRC75A-AS1Q8N1F1 130 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 C1orf64Q8NEQ6 169 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 OR8J1Q8NGP2 316 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 OR5M1Q8NGP8 315 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 OR6N1Q8NGY5 312 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 SLC25A46Q96AG3 418 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 RBM14Q96PK6 669 aaKnown RBP1.17□□□□□ -2.22
VPS50-216ENST00000484954 NPY6RQ99463 290 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 SHANK2-AS3Q9BTD1 123 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 PARP12Q9H0J9 701 aaKnown RBP1.17□□□□□ -2.22
VPS50-216ENST00000484954 SLC38A10Q9HBR0 1119 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 CTNNA3Q9UI47 895 aa1.17□□□□□ -2.22
VPS50-216ENST00000484954 PTBP2Q9UKA9 531 aaKnown RBP1.17□□□□□ -2.22
VPS50-216ENST00000484954 ADAM28Q9UKQ2 775 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms