RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PTHP01270 115 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 SLC6A6P31641 620 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 GUCA1AP43080 201 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 GSSP48637 474 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 PDLIM4P50479 330 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 MRPS34P82930 218 aaKnown RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 RUNX1T1Q06455 604 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 MICAQ29983 383 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 GSG1Q2KHT4 349 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 RFX4Q33E94 735 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 SLC36A2Q495M3 483 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 FAM122BQ7Z309 247 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 LSRQ86X29 649 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 ADGRG5Q8IZF4 528 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 SLC22A24Q8N4F4 322 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 CLDN22Q8N7P3 220 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 PAPD5Q8NDF8 572 aaKnown RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 OR4F15Q8NGB8 312 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 OR4C15Q8NGM1 316 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 HDAC2Q92769 488 aaKnown RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 NMD3Q96D46 503 aaKnown RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 MSI2Q96DH6 328 aaKnown RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 FBXO17Q96EF6 278 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 TSPAN32Q96QS1 320 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 PIMREGQ9BSJ6 248 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 CHID1Q9BWS9 393 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 CADM1Q9BY67 442 aaKnown RBP8.66□□□□□ -1.02
CPSF4-213ENST00000484112 KCNN2Q9H2S1 579 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 SIAEQ9HAT2 523 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 B3GNT2Q9NY97 397 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 SLC7A8Q9UHI5 535 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 YLPM1P49750 1951 aaKnown RBP8.65□□□□□ -1.02
CPSF4-213ENST00000484112 IGHV1-18A0A0C4DH31 117 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 VSTM5A8MXK1 200 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 RAB36O95755 333 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 CST1P01037 141 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 B4GALT1P15291 398 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 APOBEC3AP31941 199 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-213ENST00000484112 NR4A2P43354 598 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 PTDSS1P48651 473 aaKnown RBP8.65□□□□□ -1.02
CPSF4-213ENST00000484112 CD47Q08722 323 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 COX10Q12887 443 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF770Q6IQ21 691 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-213ENST00000484112 PGBD2Q6P3X8 592 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 SLC25A47Q6Q0C1 308 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 CD300LDQ6UXZ3 194 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 FOXL2NBQ6ZUU3 175 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 SYT9Q86SS6 491 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 SPATA24Q86W54 205 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 WDFY1Q8IWB7 410 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 NUP37Q8NFH4 326 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 FANK1Q8TC84 345 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 CANT1Q8WVQ1 401 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF570Q96NI8 536 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 FOXN4Q96NZ1 517 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 VRK1Q99986 396 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-213ENST00000484112 DGCR6LQ9BY27 220 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 IL20Q9NYY1 176 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 BAIAP2Q9UQB8 552 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 SAMHD1Q9Y3Z3 626 aaKnown RBP8.65□□□□□ -1.02
CPSF4-213ENST00000484112 FKBP7Q9Y680 259 aa8.65□□□□□ -1.02
CPSF4-213ENST00000484112 IGHV4-61A0A0C4DH41 118 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 SLC22A23A1A5C7 686 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 PRSS37A4D1T9 235 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 ATP6V1G2-DDX39BF2Z307 99 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 GNGT2O14610 69 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 CECR9P0C854 216 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 ZNF26P17031 533 aaPredicted RBP8.64□□□□□ -1.03
CPSF4-213ENST00000484112 CRABP1P29762 137 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 CAPZA2P47755 286 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 ARHGDIAP52565 204 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 PCBD1P61457 104 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 RAB1AP62820 205 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 ERVK-25P63136 954 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 NAAAQ02083 359 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 TOP3AQ13472 1001 aaPredicted RBP8.64□□□□□ -1.03
CPSF4-213ENST00000484112 KRR1Q13601 381 aaKnown RBP8.64□□□□□ -1.03
CPSF4-213ENST00000484112 CR1LQ2VPA4 569 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 FAM27BQ5VT28 67 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 TMEM53Q6P2H8 277 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 DNM1P34Q6PK57 102 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 ZNF620Q6ZNG0 422 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 RASSF6Q6ZTQ3 369 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 CCDC121Q6ZUS5 278 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 ASRGL1Q7L266 308 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 MDP1Q86V88 176 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 SKA3Q8IX90 412 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 C10orf67Q8IYJ2 551 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 C1orf174Q8IYL3 243 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 SYT14Q8NB59 555 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 OR52L1Q8NGH7 329 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 DNAJC9Q8WXX5 260 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 NRBF2Q96F24 287 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 DUS3LQ96G46 650 aaKnown RBP8.64□□□□□ -1.03
CPSF4-213ENST00000484112 C1orf159Q96HA4 380 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 SORCS2Q96PQ0 1159 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 OR52D1Q9H346 318 aa8.64□□□□□ -1.03
CPSF4-213ENST00000484112 VSX1Q9NZR4 365 aaPredicted RBP8.64□□□□□ -1.03
CPSF4-213ENST00000484112 DNAJB9Q9UBS3 223 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms