RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SELENOIQ9C0D9 397 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 SIRT7Q9NRC8 400 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 TREX1Q9NSU2 369 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 IMPAD1Q9NX62 359 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 GNPTGQ9UJJ9 305 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 RAD50Q92878 1312 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 ANKRD30BQ9BXX2 1392 aa3.58□□□□□ -1.84
PTCD3-214ENST00000483925 IGLV3-22A0A075B6J6 115 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 IGHV1OR21-1A0A087WYE8 117 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 A0A0A6YYD5 115 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 SMIM28A0A1B0GU29 152 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 A0A1B0GW55 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA6L10A6NI86 522 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 MPTX1A8MV57 137 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 FAM220BPB1ANY3 271 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 SMKR1H3BMG3 65 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 H7C2Y5 167 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 K7ENP7 123 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PLPP3O14495 311 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 AQP9O43315 295 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 SGCEO43556 437 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 ALOX12BO75342 701 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 TRAPPC6AO75865 159 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 TNFAIP8O95379 198 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CLDN1O95832 211 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 RENP00797 406 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CATP04040 527 aaKnown RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 HCKP08631 526 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CD48P09326 243 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L2P0CJ85 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L3P0CJ86 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L4P0CJ87 422 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L5P0CJ88 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L6P0CJ89 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L7P0CJ90 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 RD3LP0DJH9 198 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CMA1P23946 247 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CSRP3P50461 194 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 MLF1P58340 268 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 HILS1P60008 231 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 TWF1Q12792 350 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 MAD2L1BPQ15013 274 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 ZBTB6Q15916 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 TAL2Q16559 108 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 IZUMO4Q1ZYL8 232 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 KRTAP27-1Q3LI81 207 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 KLF17Q5JT82 389 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 TPTE2P1Q5T6R2 138 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 OR5M10Q6IEU7 315 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 C11orf71Q6IPW1 123 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 SPSB3Q6PJ21 355 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4L9Q6RFH8 374 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PRSS57Q6UWY2 283 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 WDR82Q6UXN9 313 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 GDPGP1Q6ZNW5 385 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 USP43Q70EL4 1123 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PAGE2Q7Z2X7 111 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PPP1R27Q86WC6 154 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CATSPER3Q86XQ3 398 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 C9orf40Q8IXQ3 194 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 BOD1L2Q8IYS8 172 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CIARTQ8N365 385 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 OR2Y1Q8NGV0 311 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 OR5AK3PQ8NH89 298 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 CDC26Q8NHZ8 85 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF564Q8TBZ8 553 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PHF10Q8WUB8 498 aaKnown RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 FRAT1Q92837 279 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF524Q96C55 264 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 RCN3Q96D15 328 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PGLYRP4Q96LB8 373 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 HIST1H4GQ99525 98 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 HES7Q9BYE0 225 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 API5Q9BZZ5 524 aaKnown RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 VCX3BQ9H321 246 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 UBE2ZQ9H832 354 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-214ENST00000483925 C1orf109Q9NX04 203 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 SDHAF2Q9NX18 166 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 DUX4Q9UBX2 424 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PRODH2Q9UF12 536 aa3.57□□□□□ -1.84
PTCD3-214ENST00000483925 PLB1Q6P1J6 1458 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 FHOD3Q2V2M9 1422 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 DHRS7CA6NNS2 312 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 TIMP1P01033 207 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 ARG1P05089 322 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 RBMY1CP0DJD4 496 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 CHRNB4P30926 498 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 KIR2DS4P43632 304 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 RGS6P49758 472 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 LMO4P61968 165 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 IFFO1Q0D2I5 559 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 ABRAXAS2Q15018 415 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 NRF1Q16656 503 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 EXOC3L4Q17RC7 722 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 C17orf58Q2M2W7 97 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 ZBED5Q49AG3 693 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 COQ5Q5HYK3 327 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 THEM4Q5T1C6 240 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 CPTPQ5TA50 214 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 BSPRYQ5W0U4 402 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms