RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 POLE4Q9NR33 117 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 IGHV2OR16-5A0A0B4J2B6 119 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 C12orf71A8MTZ7 269 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 H3BN98 237 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 PTHP01270 115 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 MMP7P09237 267 aaPredicted RBP18.14■□□□□ 0.49
SEC13-217ENST00000482647 DANCRP0C864 163 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 CALCRP30988 508 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 ART1P52961 327 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 PCBD1P61457 104 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.14■□□□□ 0.49
SEC13-217ENST00000482647 KPNB1Q14974 876 aaKnown RBP18.14■□□□□ 0.49
SEC13-217ENST00000482647 PGGHGQ32M88 737 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 SLC36A3Q495N2 470 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 AGAP6Q5VW22 663 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 B3GLCTQ6Y288 498 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 OR5K1Q8NHB7 308 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 TEX47Q8TBZ9 253 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 C1orf198Q9H425 327 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 CXorf56Q9H5V9 222 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 SRA1Q9HD15 236 aaKnown RBP18.14■□□□□ 0.49
SEC13-217ENST00000482647 REV1Q9UBZ9 1251 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 COA3Q9Y2R0 106 aaPredicted RBP18.14■□□□□ 0.49
SEC13-217ENST00000482647 MYO9AB2RTY4 2548 aa18.14■□□□□ 0.49
SEC13-217ENST00000482647 MAP1AP78559 2803 aaPredicted RBP18.13■□□□□ 0.49
SEC13-217ENST00000482647 IQCMA0A1B0GVH7 501 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 SMPD2O60906 423 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 TP53P04637 393 aaPredicted RBP18.13■□□□□ 0.49
SEC13-217ENST00000482647 SOD3P08294 240 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 TTKP33981 857 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 SYT9Q86SS6 491 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 HIPK1Q86Z02 1210 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 FBXL14Q8N1E6 418 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 DNAJC9Q8WXX5 260 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 FBXO17Q96EF6 278 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 WACQ9BTA9 647 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 B9D1Q9UPM9 204 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 SPEF1Q9Y4P9 236 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 TIMM10BQ9Y5J6 103 aa18.13■□□□□ 0.49
SEC13-217ENST00000482647 OR6C68A6NDL8 312 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 VSTM5A8MXK1 200 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 G3V2T6 193 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 ZNF35P13682 527 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 OSMP13725 252 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 ZNF32P17041 273 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 POU1F1P28069 291 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 APOBEC3AP31941 199 aaPredicted RBP18.12■□□□□ 0.49
SEC13-217ENST00000482647 CENPAP49450 140 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 HSF2Q03933 536 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 HGFACQ04756 655 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 PABPC1L2AQ5JQF8 200 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 ZNF584Q8IVC4 421 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 OR6V1Q8N148 313 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 MUC15Q8N387 334 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 NPEPL1Q8NDH3 523 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 SLC30A7Q8NEW0 376 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 SDR9C7Q8NEX9 313 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 NUP37Q8NFH4 326 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 OR1J2Q8NGS2 313 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 OR4Q3Q8NH05 313 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 IGFBPL1Q8WX77 278 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 PYDC1Q8WXC3 89 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 LRTOMTQ8WZ04 291 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 FOXN4Q96NZ1 517 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 TSSK2Q96PF2 358 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 ZNF416Q9BWM5 594 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 EMC7Q9NPA0 242 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 RPRD1BQ9NQG5 326 aaKnown RBP18.12■□□□□ 0.49
SEC13-217ENST00000482647 CA10Q9NS85 328 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 KIF17Q9P2E2 1029 aa18.12■□□□□ 0.49
SEC13-217ENST00000482647 IFNGP01579 166 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 SCG5P05408 212 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 GALK2Q01415 458 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 ZNF362Q5T0B9 420 aaPredicted RBP18.11■□□□□ 0.49
SEC13-217ENST00000482647 ZFP1Q6P2D0 407 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 UGT2A3Q6UWM9 527 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 AMIGO2Q86SJ2 522 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 DTX2Q86UW9 622 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 ZBTB46Q86UZ6 589 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 ZDHHC13Q8IUH4 622 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 ALDH16A1Q8IZ83 802 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 CENPNQ96H22 339 aaPredicted RBP18.11■□□□□ 0.49
SEC13-217ENST00000482647 GRIP2Q9C0E4 1043 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 OR2H1Q9GZK4 316 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 CXXC4Q9H2H0 198 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 PAPOLBQ9NRJ5 636 aaKnown RBP18.11■□□□□ 0.49
SEC13-217ENST00000482647 KLHL21Q9UJP4 597 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 FKBP7Q9Y680 259 aa18.11■□□□□ 0.49
SEC13-217ENST00000482647 IGLV1-36A0A0B4J1U3 117 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 RIIAD1A6NNX1 92 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 DCTN6O00399 190 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 CD8AP01732 235 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 ZNF23P17027 643 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 NR4A1P22736 598 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 LSM6P62312 80 aaKnown RBP18.1■□□□□ 0.49
SEC13-217ENST00000482647 PSG4Q00888 419 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 GLO1Q04760 184 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 DAG1Q14118 895 aa18.1■□□□□ 0.49
SEC13-217ENST00000482647 ENDOGQ14249 297 aaKnown RBP18.1■□□□□ 0.49
SEC13-217ENST00000482647 KCNMB1Q16558 191 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms