RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 TSPAN32Q96QS1 320 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 HOPXQ9BPY8 73 aaPredicted RBP11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 C19orf24Q9BVV8 132 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 MAN2C1Q9NTJ4 1040 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 GRIP1Q9Y3R0 1128 aa11.49□□□□□ -0.57
CTDSP1-208ENST00000482272 C5orf49A4QMS7 147 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 A6NIZ1 184 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 EFCAB9A8MZ26 197 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 J3KTA2 159 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 FFAR1O14842 300 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 TCF21O43680 179 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 CDC14BO60729 498 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 NCR1O76036 304 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 IGHMP01871 453 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 SLC9A3P48764 834 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 RAP1BP61224 184 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 PCBD1P61457 104 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 RAP1AP62834 184 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 PSG4Q00888 419 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 FMODQ06828 376 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 C8orf82Q6P1X6 216 aaPredicted RBP11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 RINLQ6ZS11 566 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 FKBP9P1Q75LS8 142 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 TSEN54Q7Z6J9 526 aaKnown RBP11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 TREML1Q86YW5 311 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 NRMQ8IXM6 262 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 SLC15A3Q8IY34 581 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 OFCC1Q8IZS5 231 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 OR51A7Q8NH64 312 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 AKR7LQ8NHP1 331 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 POM121L2Q96KW2 1035 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 RACGAP1Q9H0H5 632 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 EFCAB1Q9HAE3 211 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 RHCGQ9UBD6 479 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 UGT2A1Q9Y4X1 527 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 TIMM10BQ9Y5J6 103 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 ATRQ13535 2644 aa11.48□□□□□ -0.57
CTDSP1-208ENST00000482272 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 PLSCR5A0PG75 271 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 FAM157AC9JC47 383 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 CXCR6O00574 342 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 NME4O00746 187 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 NDUFAB1O14561 156 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 CCDC22O60826 627 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 RP2O75695 350 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF682O95780 498 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 MSMBP08118 114 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 CST2P09228 141 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 GAAP10253 952 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 COX4I1P13073 169 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 MAKP20794 623 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 LAP3P28838 519 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 LIPAP38571 399 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ARHGDIAP52565 204 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ERVK-25P63136 954 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 LIPEQ05469 1076 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 HFEQ30201 348 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 IFI44LQ53G44 452 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ARL9Q6T311 187 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF730Q6ZMV8 503 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 CBLL1Q75N03 491 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 LRRC75AQ8NAA5 344 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 OR51F2Q8NH61 342 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 GEMIN6Q8WXD5 167 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ACOT11Q8WXI4 607 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 WACQ9BTA9 647 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 OR2H1Q9GZK4 316 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 ELOVL3Q9HB03 270 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 CYSLTR2Q9NS75 346 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 HIF1ANQ9NWT6 349 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 GRHPRQ9UBQ7 328 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
CTDSP1-208ENST00000482272 LOC100509620A0A075B734 347 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 TRAV27A0A087WT01 109 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 A0A1W2PPL8 197 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 WNT9BO14905 357 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 PRSS23O95084 383 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF26P17031 533 aaPredicted RBP11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 RPL4P36578 427 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 ZNF81P51508 661 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 LMO4P61968 165 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 MVKQ03426 396 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 HNRNPA0Q13151 305 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 SCGB2A2Q13296 93 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 FAM209AQ5JX71 171 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 MBNL2Q5VZF2 373 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 ACSM5Q6NUN0 579 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 SYT9Q86SS6 491 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms