RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 AIREO43918 545 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 SPAG7O75391 227 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 SERPINA5P05154 406 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 FABP3P05413 133 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 CALM1P0DP23 149 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 CALM2P0DP24 149 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 CALM3P0DP25 149 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF24P17028 368 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 GPX4P36969 197 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-210ENST00000482158 TNNT2P45379 298 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-210ENST00000482158 PFN3P60673 137 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 TGM3Q08188 693 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 TWF1Q12792 350 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 SLAQ13239 276 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 PRPSAP1Q14558 356 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 PRELID2Q8N945 189 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 OR5B3Q8NH48 314 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 CREB3L1Q96BA8 519 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 STARD4Q96DR4 205 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF578Q96N58 590 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-210ENST00000482158 GOLT1BQ9Y3E0 138 aa3.39□□□□□ -1.87
SF3B1-210ENST00000482158 IGHV3-74A0A0B4J1X5 117 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 LRRIQ3A6PVS8 624 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-210ENST00000482158 EIF3HO15372 352 aaKnown RBP eCLIP3.38□□□□□ -1.87
SF3B1-210ENST00000482158 CHST1O43916 411 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 DFNA5O60443 496 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 ENTPD5O75356 428 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 RAB3DO95716 219 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 IGFBP3P17936 291 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-210ENST00000482158 FOXN2P32314 431 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 RND2P52198 227 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 CCNJQ5T5M9 372 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 METAP1DQ6UB28 335 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-210ENST00000482158 OAFQ86UD1 273 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 ZFP41Q8N8Y5 198 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 NOXO1Q8NFA2 376 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 SLC38A4Q969I6 547 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 TSNARE1Q96NA8 513 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 CHMP4BQ9H444 224 aaKnown RBP3.38□□□□□ -1.87
SF3B1-210ENST00000482158 ISYNA1Q9NPH2 558 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 PITPNC1Q9UKF7 332 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 VANGL2Q9ULK5 521 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 NSD2O96028 1365 aa3.38□□□□□ -1.87
SF3B1-210ENST00000482158 TRBV11-1A0A0K0K1C0 115 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 CTAGE15A4D2H0 777 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 C9JVG2 144 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 MAGEB4O15481 346 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-210ENST00000482158 FTH1P02794 183 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 CEACAM6P40199 344 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 ADARB1P78563 741 aaKnown RBP3.37□□□□□ -1.87
SF3B1-210ENST00000482158 SELENBP1Q13228 472 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 MAB21L1Q13394 359 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 PON2Q15165 354 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 PPM1LQ5SGD2 360 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 CARD17Q5XLA6 110 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 CEMP1Q6PRD7 247 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-210ENST00000482158 FBXW12Q6X9E4 464 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 CTAGE6Q86UF2 777 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 TTC5Q8N0Z6 440 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF681Q96N22 645 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 DCAF16Q9NXF7 216 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 OR12D3Q9UGF7 316 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 MAPK8IP3Q9UPT6 1336 aa3.37□□□□□ -1.87
SF3B1-210ENST00000482158 GPATCH8Q9UKJ3 1502 aaKnown RBP3.36□□□□□ -1.87
SF3B1-210ENST00000482158 IGLV1-36A0A0B4J1U3 117 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 SMCO3A2RU48 225 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 SMCO2A6NFE2 343 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 DNALI1O14645 258 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-210ENST00000482158 AIM2O14862 343 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 WBP4O75554 376 aaKnown RBP3.36□□□□□ -1.87
SF3B1-210ENST00000482158 RP2O75695 350 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 GABARAPO95166 117 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 WISP3O95389 354 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-210ENST00000482158 OR5H8P0DN80 308 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 PGAM1P18669 254 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 CSNK1A1P48729 337 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 EIF4EBP1Q13541 118 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF726P1Q15940 193 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 PTPN20Q4JDL3 420 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 LINC00483Q53H64 154 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 C9orf135Q5VTT2 229 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 REEP3Q6NUK4 255 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF695Q8IW36 515 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 IQCKQ8N0W5 287 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 PGAM4Q8N0Y7 254 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 OR5W2Q8NH69 310 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 FOPNLQ96NB1 174 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 OR5B12Q96R08 314 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 PANX1Q96RD7 426 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 TGS1Q96RS0 853 aaKnown RBP3.36□□□□□ -1.87
SF3B1-210ENST00000482158 GPATCH2LQ9NWQ4 482 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 LGALS13Q9UHV8 139 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 MROH7-TTC4A0A0A0MT08 1334 aa3.36□□□□□ -1.87
SF3B1-210ENST00000482158 TCP11X1B4DZS4 312 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 KLHL41O60662 606 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 OR2F2O95006 317 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 BCHEP06276 602 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 ACSM4P0C7M7 580 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 OTX1P32242 354 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-210ENST00000482158 RAB10P61026 200 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms