RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 NPRL2Q8WTW4 380 aa17.37■□□□□ 0.37
CCM2-214ENST00000481194 MIB2Q96AX9 1013 aa17.37■□□□□ 0.37
CCM2-214ENST00000481194 FLRT3Q9NZU0 649 aa17.37■□□□□ 0.37
CCM2-214ENST00000481194 UPK1BO75841 260 aa17.37■□□□□ 0.37
CCM2-214ENST00000481194 ARHGDIBP52566 201 aa17.37■□□□□ 0.37
CCM2-214ENST00000481194 SFXN4Q6P4A7 337 aa17.37■□□□□ 0.37
CCM2-214ENST00000481194 ACOD1A6NK06 481 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 TSPAN2O60636 221 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 GSTT2P0CG29 244 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 PTBP1P26599 531 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCM2-214ENST00000481194 MEF2DQ14814 521 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 DGAT2L6Q6ZPD8 337 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 OR2M3Q8NG83 312 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 KCNG3Q8TAE7 436 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 ZNF285Q96NJ3 590 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 MTCL1Q9Y4B5 1905 aaKnown RBP17.36■□□□□ 0.37
CCM2-214ENST00000481194 TRIOBPQ9H2D6 2365 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 CEP290O15078 2479 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 C5orf51A6NDU8 294 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 AQP6Q13520 282 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 SLC17A1Q14916 467 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 PHC2Q8IXK0 858 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 OR56B1Q8NGI3 324 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 NOX4Q9NPH5 578 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 C14orf119Q9NWQ9 140 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 STEAP1Q9UHE8 339 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 EIF5AP63241 154 aaKnown RBP17.36■□□□□ 0.37
CCM2-214ENST00000481194 OR11L1Q8NGX0 322 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 PLEKHJ1Q9NW61 149 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 ASH2LQ9UBL3 628 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 EXOGQ9Y2C4 368 aaKnown RBP17.36■□□□□ 0.37
CCM2-214ENST00000481194 DHRS1Q96LJ7 313 aa17.36■□□□□ 0.37
CCM2-214ENST00000481194 ZNF850A8MQ14 1090 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 RAC3P60763 192 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 OR14A2Q96R54 314 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 DNTTIP1Q9H147 329 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 TIMM8AO60220 97 aaPredicted RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 UBL3O95164 117 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 C17orf82Q86X59 251 aaPredicted RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 SEMA6DQ8NFY4 1073 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 SMIM19Q96E16 107 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 PMS2P2O95744 297 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 H2AFB2P0C5Z0 115 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 RBMXP38159 391 aaKnown RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 CCDC36Q8IYA8 594 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 C10orf111Q8N326 155 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 ROBO4Q8WZ75 1007 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 ATF6BQ99941 703 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 CCDC86Q9H6F5 360 aaKnown RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 METTL8Q9H825 291 aaKnown RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 DTX4Q9Y2E6 619 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 ZNF780AO75290 641 aaPredicted RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 LIFP15018 202 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 ARSKQ6UWY0 536 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 C16orf47Q6ZP98 133 aaPredicted RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 FLVCR1-AS1Q8TAF5 88 aa17.35■□□□□ 0.37
CCM2-214ENST00000481194 ZNF845Q96IR2 970 aaPredicted RBP17.35■□□□□ 0.37
CCM2-214ENST00000481194 ZC3H12DA2A288 527 aaKnown RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 SRMP19623 302 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 RFC3P40938 356 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 TPBGQ13641 420 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 PRSS53Q2L4Q9 553 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 TMED4Q7Z7H5 227 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 EGFL6Q8IUX8 553 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 OR4D11Q8NGI4 311 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 FGF11Q92914 225 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 NARS2Q96I59 477 aaKnown RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 SLCO5A1Q9H2Y9 848 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 DYNLRB1Q9NP97 96 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 GPR27Q9NS67 375 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 DSPPQ9NZW4 1301 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 TEX51A0A1B0GUA7 166 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 FFAR1O14842 300 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 CLUP10909 449 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 PVALBP20472 110 aaPredicted RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 MTCP1P56278 107 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 OR13C9Q8NGT0 318 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 NELFAQ9H3P2 528 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 IGHV3-15A0A0B4J1V0 119 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 B4DXG7 233 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 HPGDSO60760 199 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 BPNT1O95861 308 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 VAMP1P23763 118 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 EFNA3P52797 238 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 GP2P55259 537 aaKnown RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 MAB21L1Q13394 359 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 CDK5R1Q15078 307 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 ELFN2Q5R3F8 820 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 TSPAN32Q96QS1 320 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 NOS1APO75052 506 aaPredicted RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 EPHA2P29317 976 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 B3GNTL1Q67FW5 361 aaPredicted RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 RPL3LQ92901 407 aaKnown RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 NAA50Q9GZZ1 169 aaKnown RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 RPS4Y1P22090 263 aaKnown RBP17.34■□□□□ 0.37
CCM2-214ENST00000481194 FAPQ12884 760 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 SHBQ15464 509 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 ACTBL2Q562R1 376 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 SLC25A30Q5SVS4 291 aa17.34■□□□□ 0.37
CCM2-214ENST00000481194 GFRALQ6UXV0 394 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms