RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CD14P08571 375 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 MMP7P09237 267 aaPredicted RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 COX5BP10606 129 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 GSTM3P21266 225 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 SDHAP31040 664 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 TOP3AQ13472 1001 aaPredicted RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 ZBED5Q49AG3 693 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 PABPC1L2AQ5JQF8 200 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 SAMD4BQ5PRF9 694 aaKnown RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 MBNL2Q5VZF2 373 aaKnown RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 FOXL2NBQ6ZUU3 175 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 VTCN1Q7Z7D3 282 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 ARIH2OSQ8N7S6 290 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 MOSPD2Q8NHP6 518 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 NABP1Q96AH0 204 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 RAB39BQ96DA2 213 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 C1orf159Q96HA4 380 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 ZNF570Q96NI8 536 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 GPX7Q96SL4 187 aaPredicted RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 EGLN1Q9GZT9 426 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 TPK1Q9H3S4 243 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 GORASP2Q9H8Y8 452 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 NMNAT1Q9HAN9 279 aaPredicted RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 MAN2C1Q9NTJ4 1040 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 ATPIF1Q9UII2 106 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 ZDHHC8Q9ULC8 765 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 AURKCQ9UQB9 309 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 GRIP1Q9Y3R0 1128 aa9.83□□□□□ -0.84
CCM2-213ENST00000480658 HEATR1Q9H583 2144 aaKnown RBP9.83□□□□□ -0.84
CCM2-213ENST00000480658 KIAA1324LA8MWY0 1029 aaPredicted RBP9.82□□□□□ -0.84
CCM2-213ENST00000480658 NDUFB2O95178 105 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 SLC2A10O95528 541 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 FAM157BP0CG42 384 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 CCNOP22674 350 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 ALDH3B1P43353 468 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 RPS6KA3P51812 740 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 DVL1P1P54792 670 aaPredicted RBP9.82□□□□□ -0.84
CCM2-213ENST00000480658 CDH15P55291 814 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 PSME3P61289 254 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 MYBPC1Q00872 1141 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 RUNX1T1Q06455 604 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 AQP6Q13520 282 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 LAPTM4AQ15012 233 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 SGCAQ16586 387 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 HFEQ30201 348 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 FAM120AOSQ5T036 256 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 LIPNQ5VXI9 398 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 SLC25A47Q6Q0C1 308 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 PEG10Q86TG7 708 aaKnown RBP9.82□□□□□ -0.84
CCM2-213ENST00000480658 GLCCI1Q86VQ1 547 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 OR1J1Q8NGS3 322 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 OR51A7Q8NH64 312 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 NSMAFQ92636 917 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 HDAC2Q92769 488 aaKnown RBP9.82□□□□□ -0.84
CCM2-213ENST00000480658 NMD3Q96D46 503 aaKnown RBP9.82□□□□□ -0.84
CCM2-213ENST00000480658 ELMOD3Q96FG2 381 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 LRRC37BQ96QE4 947 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 TSPAN32Q96QS1 320 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 MYLK2Q9H1R3 596 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 DCAF13Q9NV06 445 aaKnown RBP9.82□□□□□ -0.84
CCM2-213ENST00000480658 ADA2Q9NZK5 511 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 TAAR3PQ9P1P4 343 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 ADAM21Q9UKJ8 722 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 TLN2Q9Y4G6 2542 aa9.82□□□□□ -0.84
CCM2-213ENST00000480658 TRAV27A0A087WT01 109 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 A0A087WUU8 490 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 TEX13CA0A0J9YWL9 993 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 A0A1W2PPL8 197 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 PRSS37A4D1T9 235 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 C5orf49A4QMS7 147 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 CLDN25C9JDP6 229 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 TPD52L2O43399 206 aaKnown RBP9.81□□□□□ -0.84
CCM2-213ENST00000480658 SNX3O60493 162 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 PRSS23O95084 383 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 PATE4P0C8F1 98 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 HSD17B1P14061 328 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 ZNF32P17041 273 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 MAKP20794 623 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 TNFSF4P23510 183 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 IGFBP5P24593 272 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 CRABP1P29762 137 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 RGS6P49758 472 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 ZNF81P51508 661 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 LSM6P62312 80 aaKnown RBP9.81□□□□□ -0.84
CCM2-213ENST00000480658 SF3A3Q12874 501 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCM2-213ENST00000480658 FGD3Q5JSP0 725 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 GLYATQ6IB77 296 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 RPL13AP3Q6NVV1 102 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 C16orf89Q6UX73 402 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 DPY19L2P2Q6ZN68 376 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 WDFY1Q8IWB7 410 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 PGAM4Q8N0Y7 254 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 ARHGAP24Q8N264 748 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 LINC00471Q8N535 108 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 ICA1LQ8NDH6 482 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 OR51F2Q8NH61 342 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 SLC7A13Q8TCU3 470 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 POM121L2Q96KW2 1035 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms