RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TSPAN14Q8NG11 270 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 OR6X1Q8NH79 312 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 ABHD3Q8WU67 409 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 IPCEF1Q8WWN9 437 aaPredicted RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 GGHQ92820 318 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 RFKQ969G6 155 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 OTULINQ96BN8 352 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 NMD3Q96D46 503 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 LGALS12Q96DT0 336 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 RNFT2Q96EX2 444 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 ADAD1Q96M93 576 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 ZNF385AQ96PM9 386 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 OR2M2Q96R28 347 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 SLX1AQ9BQ83 275 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 RACGAP1Q9H0H5 632 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 SYT4Q9H2B2 425 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 OR51V1Q9H2C8 321 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 DUSP21Q9H596 190 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 AMBNQ9NP70 447 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 CCNB1IP1Q9NPC3 277 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 RPRD1BQ9NQG5 326 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 MRPS18AQ9NVS2 196 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 SCN3BQ9NY72 215 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 WARS2Q9UGM6 360 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP48-208ENST00000479177 RCE1Q9Y256 329 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 TPRKBQ9Y3C4 175 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 RPL36Q9Y3U8 105 aaKnown RBP5.89□□□□□ -1.47
USP48-208ENST00000479177 FLVCR1Q9Y5Y0 555 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 PCNX1Q96RV3 2341 aa5.89□□□□□ -1.47
USP48-208ENST00000479177 A0A087WXM4 84 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 IGLV1-36A0A0B4J1U3 117 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 SLC22A20A6NK97 555 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 SNTNA6NMZ2 147 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ZNF724A8MTY0 619 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 CENPBD1B2RD01 187 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 PTGES3LE9PB15 166 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 DCTN6O00399 190 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ZNHIT1O43257 154 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 RGS10O43665 173 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 AKAP8O43823 692 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 AHCYL1O43865 530 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 MRPS14O60783 128 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 ZNF432O94892 652 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 GLCEO94923 617 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 APOL3O95236 402 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 CDK1P06493 297 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ADRA2AP08913 450 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 FCGR2AP12318 317 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 CTLA4P16410 223 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 EEF1B2P24534 225 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 PYCR1P32322 319 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 MTNR1AP48039 350 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 CLDN17P56750 224 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 FMODQ06828 376 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 PIGFQ07326 219 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 LGALS3BPQ08380 585 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 RASGEF1BQ0VAM2 473 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 GGTLC2Q14390 218 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 KLHL12Q53G59 568 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 KRTCAP3Q53RY4 240 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 SLC35D3Q5M8T2 416 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 LINC01590Q5TEZ4 76 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 LCN1P1Q5VSP4 162 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 PCSK4Q6UW60 755 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 B3GNT6Q6ZMB0 384 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 PRSS48Q7RTY5 328 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 CISD2Q8N5K1 135 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 TEX19Q8NA77 164 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 PROKR2Q8NFJ6 384 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 OR2T4Q8NH00 348 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 FAR1Q8WVX9 515 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ZNRF4Q8WWF5 429 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 MYDGFQ969H8 173 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 TMEM45BQ96B21 275 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 SNRNP40Q96DI7 357 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 SLC25A44Q96H78 314 aaPredicted RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 TSSK2Q96PF2 358 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 COPS4Q9BT78 406 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 EMC6Q9BV81 110 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 MRPL13Q9BYD1 178 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 MRPS26Q9BYN8 205 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 SLC25A18Q9H1K4 315 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 RNF122Q9H9V4 155 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 FGF20Q9NP95 211 aaPredicted RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 ASB6Q9NWX5 421 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 HAO2Q9NYQ3 351 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 EMC3Q9P0I2 261 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 H2AFY2Q9P0M6 372 aaPredicted RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 KLHL9Q9P2J3 617 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ERVK-18Q9QC07 812 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 DIMT1Q9UNQ2 313 aaKnown RBP5.88□□□□□ -1.47
USP48-208ENST00000479177 FKBP7Q9Y680 259 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 HIVEP3Q5T1R4 2406 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 FAM208BQ5VWN6 2430 aa5.88□□□□□ -1.47
USP48-208ENST00000479177 ARHGAP21Q5T5U3 1957 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 NCOA6Q14686 2063 aaPredicted RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 ZNF462Q96JM2 2506 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms