RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 NANSQ9NR45 359 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 LOC100509620A0A075B734 347 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 CLPSL1A2RUU4 121 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 PRORSD1PA6NEY8 169 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 F5H0A9 414 aaPredicted RBP14.42□□□□□ -0.1
VIM-204ENST00000478746 RGS16O15492 202 aaPredicted RBP14.42□□□□□ -0.1
VIM-204ENST00000478746 TGDSO95455 350 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 NGFP01138 241 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 PPP1CBP62140 327 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 BST1Q10588 318 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 CDK5R2Q13319 367 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 ZMYND11Q15326 602 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 HIST3H3Q16695 136 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 DEFB112Q30KQ8 113 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 KRT71Q3SY84 523 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 MTX3Q5HYI7 312 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 HHATQ5VTY9 493 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 ASPHD2Q6ICH7 369 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 FIP1L1Q6UN15 594 aaKnown RBP14.42□□□□□ -0.1
VIM-204ENST00000478746 LINC00114Q6XXX2 140 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 RANBP3LQ86VV4 465 aaPredicted RBP14.42□□□□□ -0.1
VIM-204ENST00000478746 ABHD4Q8TB40 342 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 SAMD8Q96LT4 415 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 WFDC6Q9BQY6 131 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 PAIP1Q9H074 479 aaKnown RBP14.42□□□□□ -0.1
VIM-204ENST00000478746 C1RLQ9NZP8 487 aa14.42□□□□□ -0.1
VIM-204ENST00000478746 TRAV40A0A0B4J280 105 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 TRPC5OSA6NMA1 111 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 SRRM5B3KS81 715 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 H3BSA7 217 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 HDAC3O15379 428 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 TIMM8AO60220 97 aaPredicted RBP14.41□□□□□ -0.1
VIM-204ENST00000478746 ALX3O95076 343 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 NDUFA7O95182 113 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 WNT2P09544 360 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 H2AFXP16104 143 aaPredicted RBP14.41□□□□□ -0.1
VIM-204ENST00000478746 ZNF32P17041 273 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 TNFRSF1AP19438 455 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 TNFSF4P23510 183 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 POLR2JP52435 117 aaKnown RBP14.41□□□□□ -0.1
VIM-204ENST00000478746 CDK6Q00534 326 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 ZNF74Q16587 644 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 OR10S1Q8NGN2 331 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 AKR7LQ8NHP1 331 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 GTF2H4Q92759 462 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 ZNF607Q96SK3 696 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 PRDM13Q9H4Q3 707 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 EVA1AQ9H8M9 152 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 ZIM2Q9NZV7 527 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 LRCH1Q9Y2L9 728 aa14.41□□□□□ -0.1
VIM-204ENST00000478746 DOCK11Q5JSL3 2073 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 SELEP16581 610 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 CDAP32320 146 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 MDH2P40926 338 aaKnown RBP14.4□□□□□ -0.1
VIM-204ENST00000478746 RELBQ01201 579 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 PAX2Q02962 417 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 MPP2Q14168 576 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 HLXQ14774 488 aaPredicted RBP14.4□□□□□ -0.1
VIM-204ENST00000478746 SGCAQ16586 387 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 TAF9Q16594 264 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 GCNT6Q5T4J0 391 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 FAM205BPQ63HN1 556 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 ZNF613Q6PF04 617 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 TTC33Q6PID6 262 aaPredicted RBP14.4□□□□□ -0.1
VIM-204ENST00000478746 RFPL4BQ6ZWI9 263 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 ZER1Q7Z7L7 766 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 RAB40AQ8WXH6 277 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 THOC1Q96FV9 657 aaKnown RBP14.4□□□□□ -0.1
VIM-204ENST00000478746 MCHR1Q99705 422 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 SLC30A2Q9BRI3 323 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 SSBP3Q9BWW4 388 aaPredicted RBP14.4□□□□□ -0.1
VIM-204ENST00000478746 MRPL13Q9BYD1 178 aaKnown RBP14.4□□□□□ -0.1
VIM-204ENST00000478746 ELOVL3Q9HB03 270 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 KCNK9Q9NPC2 374 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 SLCO1B3Q9NPD5 702 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 PPP1R3CQ9UQK1 317 aa14.4□□□□□ -0.1
VIM-204ENST00000478746 NBEAL2Q6ZNJ1 2754 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 CEACAM18A8MTB9 384 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 BLOC1S5-TXNDC5H3BN57 136 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 CHP2O43745 196 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 SERPINB7O75635 380 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 UMPSP11172 480 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 ARHGDIAP52565 204 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 KRTAP10-3P60369 221 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 MRPS34P82930 218 aaKnown RBP14.39□□□□□ -0.11
VIM-204ENST00000478746 PSG4Q00888 419 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 PSG7Q13046 419 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 SLC2A7Q6PXP3 512 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 BRD3OSQ6XYD6 125 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 Q6YL49 198 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 ALDH16A1Q8IZ83 802 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 MUC20Q8N307 709 aaPredicted RBP14.39□□□□□ -0.11
VIM-204ENST00000478746 POU5F2Q8N7G0 328 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 GOLGA6L1Q8N7Z2 621 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 NOXO1Q8NFA2 376 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 OR2Z1Q8NG97 314 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 SIGLEC11Q96RL6 698 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 PAIP2Q9BPZ3 127 aaKnown RBP14.39□□□□□ -0.11
VIM-204ENST00000478746 MARCH7Q9H992 704 aa14.39□□□□□ -0.11
VIM-204ENST00000478746 NOX4Q9NPH5 578 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms