RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 TOM1O60784 492 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 KERAO60938 352 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 SURF6O75683 361 aaKnown RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 CNMDO75829 334 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 ERLIN2O94905 339 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 UTS2O95399 124 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 OR8U9P0C7N5 309 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 CALCBP10092 127 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 DBTP11182 482 aaKnown RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 SLC2A5P22732 501 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 F2RP25116 425 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 ACADVLP49748 655 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 VSX2P58304 361 aaPredicted RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 PPP1CBP62140 327 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 OGDHQ02218 1023 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 CLINT1Q14677 625 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 MAD2L1BPQ15013 274 aaPredicted RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 SFT2D3Q587I9 215 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 TMEM41BQ5BJD5 291 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 TMPPEQ6ZT21 453 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 ASCL5Q7RTU5 278 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 RABEPKQ7Z6M1 372 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 NAA40Q86UY6 237 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 NUDCD3Q8IVD9 361 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 TMEM256Q8N2U0 113 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 HDDC3Q8N4P3 179 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 LRRC75AQ8NAA5 344 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 OR52H1Q8NGJ2 320 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 CCDC47Q96A33 483 aaKnown RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 CNDP1Q96KN2 507 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 IFT74Q96LB3 600 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 SAMD8Q96LT4 415 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 ATP6V0BQ99437 205 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 P2RX4Q99571 388 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 SLC39A3Q9BRY0 314 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 MFFQ9GZY8 342 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 THAP9Q9H5L6 903 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 AZI2Q9H6S1 392 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 SLC38A10Q9HBR0 1119 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 FARSBQ9NSD9 589 aaKnown RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 TMOD2Q9NZR1 351 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 EPS15L1Q9UBC2 864 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 RNF14Q9UBS8 474 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 TRMT112Q9UI30 125 aaKnown RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 OR10H1Q9Y4A9 318 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 LTBP2Q14767 1821 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 OR5B21A6NL26 309 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 EIF1BO60739 113 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 TGFAP01135 160 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 LHBP01229 141 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 IGLV3-25P01717 112 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 PFN1P07737 140 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 PRB4P10163 310 aaPredicted RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 ETS1P14921 441 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 STMN1P16949 149 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 DNAJB1P25685 340 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 SERPINB5P36952 375 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 FDFT1P37268 417 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 PRPHP41219 470 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 EIF1P41567 113 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 EPS15P42566 896 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 GALR1P47211 349 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 QARSP47897 775 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 IDH2P48735 452 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 KRTAP10-4P60372 401 aaPredicted RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 GMFBP60983 142 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 UBE2NP61088 152 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 PDZK1IP1Q13113 114 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 SCGB2A2Q13296 93 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 INAQ16352 499 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 ORMDL2Q53FV1 153 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 PYDC2Q56P42 97 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 YIF1BQ5BJH7 314 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 RNASE13Q5GAN3 156 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 C10orf120Q5SQS8 335 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 C1orf220Q5T0J3 134 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 C16orf87Q6PH81 154 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 BLOC1S2Q6QNY1 142 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 PLET1Q6UQ28 207 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 TEX43Q6ZNM6 134 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 LRRC74BQ6ZQY2 392 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 CCDC80Q76M96 950 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 SGPP2Q8IWX5 399 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 GTPBP8Q8N3Z3 284 aaPredicted RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 MRPL43Q8N983 215 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 OR1F12Q8NHA8 337 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 EMG1Q92979 244 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 YIPF5Q969M3 257 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 FAM3DQ96BQ1 224 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 PIK3IP1Q96FE7 263 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 DUS3LQ96G46 650 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 HSFY1Q96LI6 401 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 C12orf42Q96LP6 360 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 TTC25Q96NG3 672 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 SECISBP2Q96T21 854 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 SORT1Q99523 831 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 CHCHD7Q9BUK0 85 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 GCOM2Q9BZD3 368 aaPredicted RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 ABCG5Q9H222 651 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 ZSCAN16Q9H4T2 348 aaPredicted RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms