RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF691Q5VV52 312 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 TIGD3Q6B0B8 471 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 PVRIGQ6DKI7 326 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 APOBEC3HQ6NTF7 200 aaKnown RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 CERS6Q6ZMG9 384 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ZNF621Q6ZSS3 439 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 LINC00336Q6ZUF6 198 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 TMEM179BQ7Z7N9 219 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 KRTAP11-1Q8IUC1 163 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 CMTM1Q8IZ96 169 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 IQCKQ8N0W5 287 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 TRAM1L1Q8N609 369 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ATP6V0D2Q8N8Y2 350 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 OR2T33Q8NG76 320 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 OR2AP1Q8NGE2 309 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 OR1S2Q8NGQ3 325 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 CAPSLQ8WWF8 208 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 TFGQ92734 400 aaPredicted RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 FRAT1Q92837 279 aaPredicted RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 NEIL2Q969S2 332 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ISOC2Q96AB3 205 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 APH1AQ96BI3 265 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 FGGYQ96C11 551 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ZNF414Q96IQ9 312 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 NOL4LQ96MY1 436 aaPredicted RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 OXGR1Q96P68 337 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 CTRCQ99895 268 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 SLC35A5Q9BS91 424 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 MED10Q9BTT4 135 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 SPZ1Q9BXG8 430 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 SHCBP1LQ9BZQ2 653 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ACTR3CQ9C0K3 210 aaPredicted RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 NAA50Q9GZZ1 169 aaKnown RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 PTGES2Q9H7Z7 377 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 CAB39LQ9H9S4 337 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ANKHQ9HCJ1 492 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 RETNQ9HD89 108 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 DMAP1Q9NPF5 467 aaPredicted RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ZC4H2Q9NQZ6 224 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 EMC3Q9P0I2 261 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 NXT1Q9UKK6 140 aaKnown RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 ERVW-1Q9UQF0 538 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 TSSC4Q9Y5U2 329 aaPredicted RBP2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 URGCP-MRPS24S4R325 110 aa2.73□□□□□ -1.97
SMARCA1-204ENST00000478420 MGAT4DA6NG13 374 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 VSTM2BA6NLU5 285 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 K7ENP7 123 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 HSBP1O75506 76 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 GPX5O75715 221 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 ZMPSTE24O75844 475 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 SC5DO75845 299 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 KLK1P06870 262 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 RD3LP0DJH9 198 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 MGMTP16455 207 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 ELK1P19419 428 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 CNR1P21554 472 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 VDAC1P21796 283 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 BGNP21810 368 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 HOXA9P31269 272 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 EVI2BP34910 448 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 CDC34P49427 236 aaPredicted RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 KPNA2P52292 529 aaKnown RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 LIM2P55344 173 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 MRPS11P82912 194 aaKnown RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 TRAM2Q15035 370 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 GABRA6Q16445 453 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 TRIM16LQ309B1 348 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 PTPN20Q4JDL3 420 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 MFSD14CQ5VZR4 134 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 PRMT9Q6P2P2 845 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 FAM199XQ6PEV8 388 aaPredicted RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 CXCL17Q6UXB2 119 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 TMPRSS11AQ6ZMR5 421 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 PAGE2Q7Z2X7 111 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 HSD17B13Q7Z5P4 300 aaPredicted RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 LRRC34Q8IZ02 419 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 OR2L8Q8NGY9 312 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 LYPD6BQ8NI32 183 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 LGALS14Q8TCE9 139 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 ACOT11Q8WXI4 607 aaPredicted RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 ING5Q8WYH8 240 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 MARC2Q969Z3 335 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 RNF170Q96K19 258 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 IMMP1LQ96LU5 166 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 OR5B2Q96R09 309 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 CHRNA10Q9GZZ6 450 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 C1orf198Q9H425 327 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 PIGUQ9H490 435 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 WDR55Q9H6Y2 383 aaPredicted RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 ISG20L2Q9H9L3 353 aaKnown RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 IMP3Q9NV31 184 aaKnown RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 NECAP2Q9NVZ3 263 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 OR1A1Q9P1Q5 309 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 NAGKQ9UJ70 344 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 LSM7Q9UK45 103 aaKnown RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 KCNIP3Q9Y2W7 256 aa2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 YARS2Q9Y2Z4 477 aaKnown RBP2.72□□□□□ -1.97
SMARCA1-204ENST00000478420 ZCCHC6Q5VYS8 1495 aaKnown RBP2.71□□□□□ -1.97
SMARCA1-204ENST00000478420 SMIM28A0A1B0GU29 152 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms