RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 TMEM69Q5SWH9 247 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 BCL2L15Q5TBC7 163 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 ANKRD16Q6P6B7 361 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 NTNG2Q96CW9 530 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 ORAI1Q96D31 301 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 ABHD6Q9BV23 337 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 OR51J1Q9H342 316 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 AUNIPQ9H7T9 357 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 HRASLSQ9HDD0 168 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 WIF1Q9Y5W5 379 aa10.95□□□□□ -0.66
PTPRF-212ENST00000477970 CPED1A4D0V7 1026 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 NPIPA5E9PKD4 350 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SLC17A2O00624 439 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 GPANK1O95872 356 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 TGM6O95932 706 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 HLA-DQA2P01906 255 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 ADH6P28332 368 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 MAGEB1P43366 347 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 TAS2R20P59543 309 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 RIPPLY1Q0D2K3 151 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 FOXF1Q12946 379 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SNTA1Q13424 505 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 EIF2B1Q14232 305 aaKnown RBP10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SEZ6L2Q6UXD5 910 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 LRRC69Q6ZNQ3 347 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 KRT77Q7Z794 578 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 ELP5Q8TE02 316 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 TMEM246Q9BRR3 403 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 CLEC4AQ9UMR7 237 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 NPIPA1Q9UND3 350 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 LRP12Q9Y561 859 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 CACNA1HO95180 2353 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 KHDRBS3O75525 346 aaKnown RBP10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SPARCP09486 303 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 CDK2P24941 298 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 PRSS45Q7RTY3 260 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 TMPRSS12Q86WS5 348 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 FADS6Q8N9I5 356 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 OR52I2Q8NH67 350 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 ST7LQ8TDW4 575 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 MED30Q96HR3 178 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 STMN3Q9NZ72 180 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 PPP4R1LQ9P1A2 415 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 MRPS7Q9Y2R9 242 aaKnown RBP10.94□□□□□ -0.66
PTPRF-212ENST00000477970 NPTNQ9Y639 398 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 PCNX3Q9H6A9 2034 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 A0A1B0GTH9 108 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 A0A1B0GVI7 797 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SULT1A3P0DMM9 295 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SULT1A4P0DMN0 295 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 SDHBP21912 280 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 ACHEP22303 614 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 CCKBRP32239 447 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 ZNF41P51814 821 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-212ENST00000477970 HSF1Q00613 529 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 FAM109AQ8N4B1 249 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 OR10AC1Q8NH08 325 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 POC1BQ8TC44 478 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 CRB3Q9BUF7 120 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 C20orf85Q9H1P6 137 aa10.94□□□□□ -0.66
PTPRF-212ENST00000477970 COA3Q9Y2R0 106 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-212ENST00000477970 LOC102725191A0A1B0GVB3 256 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 NTN3O00634 580 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 PEX14O75381 377 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 PNPP00491 289 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 SYPP08247 313 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 RCVRNP35243 200 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 SOX2P48431 317 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 CAPZA1P52907 286 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 MELKQ14680 651 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 OR7A5Q15622 319 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 STPG1Q5TH74 334 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 SLC35D2Q76EJ3 337 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 SLC25A43Q8WUT9 341 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 GFM1Q96RP9 751 aaKnown RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 BEX2Q9BXY8 128 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 RANBP3Q9H6Z4 567 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 PARD6AQ9NPB6 346 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 SERINC1Q9NRX5 453 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 TAS2R8Q9NYW2 309 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 MED11Q9P086 117 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 A0A1B0GUH1 482 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 HLA-DOBP13765 273 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 IL11P20809 199 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 TLE3Q04726 772 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 SLC23A3Q6PIS1 610 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 ARSKQ6UWY0 536 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 RHOUQ7L0Q8 258 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 OR2M3Q8NG83 312 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 TSEN15Q8WW01 171 aaKnown RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 ASB5Q8WWX0 329 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 PTX4Q96A99 478 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 ARL5BQ96KC2 179 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 MRPL13Q9BYD1 178 aaKnown RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 DHDHQ9UQ10 334 aa10.93□□□□□ -0.66
PTPRF-212ENST00000477970 RPH3AQ9Y2J0 694 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-212ENST00000477970 LOC390937A0A1W2PQ73 354 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms