RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 BCL2L14Q9BZR8 327 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 NDEL1Q9GZM8 345 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 CCNB1IP1Q9NPC3 277 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 REV1Q9UBZ9 1251 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 ADAM21Q9UKJ8 722 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 ADAM18Q9Y3Q7 739 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 IGLV3-9A0A075B6K5 115 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 DAOP14920 347 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 APEX1P27695 318 aaKnown RBP18.67■□□□□ 0.58
COL9A3-211ENST00000477612 LAP3P28838 519 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 APLNRP35414 380 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 FXYD6P3P58550 94 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 PSG4Q00888 419 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 MESTQ5EB52 335 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 GPR139Q6DWJ6 353 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 SYT3Q9BQG1 590 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 IL1RAPQ9NPH3 570 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 KRCC1Q9NPI7 259 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-211ENST00000477612 MYEF2Q9P2K5 600 aaKnown RBP18.67■□□□□ 0.58
COL9A3-211ENST00000477612 JMJD1CQ15652 2540 aa18.67■□□□□ 0.58
COL9A3-211ENST00000477612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.67■□□□□ 0.588e-12■■■■□ 20.9
COL9A3-211ENST00000477612 PRSS37A4D1T9 235 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 ICMTO60725 284 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 GADD45GO95257 159 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 TXNDC12O95881 172 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 FAM107AO95990 144 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 STOMP27105 288 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 SDHAP31040 664 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 GUCA1AP43080 201 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-211ENST00000477612 HSF2Q03933 536 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 C6orf52Q5T4I8 152 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 THSD4Q6ZMP0 1018 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 PRIMA1Q86XR5 153 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 UBASH3BQ8TF42 649 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 NSL1Q96IY1 281 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 RSRC1Q96IZ7 334 aaKnown RBP18.66■□□□□ 0.58
COL9A3-211ENST00000477612 ZNF570Q96NI8 536 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 GPA33Q99795 319 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 POLE4Q9NR33 117 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 YAE1D1Q9NRH1 226 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 AURKCQ9UQB9 309 aa18.66■□□□□ 0.58
COL9A3-211ENST00000477612 A8MV72 311 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-211ENST00000477612 XKRYO14609 159 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 FAM157BP0CG42 384 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 APEHP13798 732 aaKnown RBP18.65■□□□□ 0.58
COL9A3-211ENST00000477612 MSR1P21757 451 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 PCBD1P61457 104 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 RIN1Q13671 783 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 ENDOGQ14249 297 aaKnown RBP18.65■□□□□ 0.58
COL9A3-211ENST00000477612 DPY19L2P2Q6ZN68 376 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 ZER1Q7Z7L7 766 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 HIPK1Q86Z02 1210 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 C1orf174Q8IYL3 243 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 ALDH16A1Q8IZ83 802 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 ARHGAP24Q8N264 748 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 OR52J3Q8NH60 311 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 C11orf40Q8WZ69 217 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 MCUR1Q96AQ8 359 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 OR2H1Q9GZK4 316 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 BPESC1Q9GZL8 116 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 TMEM160Q9NX00 188 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 VSX1Q9NZR4 365 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-211ENST00000477612 ACTR3BQ9P1U1 418 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 DUSP13Q9UII6 198 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 TIMM10BQ9Y5J6 103 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 V9GYQ6 96 aa18.65■□□□□ 0.58
COL9A3-211ENST00000477612 LOC100509620A0A075B734 347 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 H7C1C5 153 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 SCG5P05408 212 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 FABP3P05413 133 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 TACSTD2P09758 323 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 IGHV4-31P0DP07 118 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 LCN6P62502 163 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 MXRA7P84157 204 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 CYB5R2Q6BCY4 276 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 AKR7LQ8NHP1 331 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 SYNPRQ8TBG9 265 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 ZNF416Q9BWM5 594 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 WNT5BQ9H1J7 359 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 TPK1Q9H3S4 243 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 FZR1Q9UM11 496 aa18.64■□□□□ 0.57
COL9A3-211ENST00000477612 IGHV4-61A0A0C4DH41 118 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 TEX13CA0A0J9YWL9 993 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 A0A1W2PPL8 197 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 UNC119BA6NIH7 251 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 B2RBV5 119 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 CLPTM1O96005 669 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 LCKP06239 509 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 COX5BP10606 129 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 ZNF23P17027 643 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 ALDH3B1P43353 468 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 GZMKP49863 264 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 HMGA2P52926 109 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 SELENOVP59797 346 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 ERVS71-1P61550 626 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 SPIBQ01892 262 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 KRR1Q13601 381 aaKnown RBP18.63■□□□□ 0.57
COL9A3-211ENST00000477612 GGTLC2Q14390 218 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 ELFN2Q5R3F8 820 aa18.63■□□□□ 0.57
COL9A3-211ENST00000477612 SMARCD3Q6STE5 483 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms