RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 TRPM8Q7Z2W7 1104 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 RBM45Q8IUH3 476 aaKnown RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 GCNT2Q8N0V5 402 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ARHGAP24Q8N264 748 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 SLC43A2Q8N370 569 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 RBM15BQ8NDT2 890 aaKnown RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 OR6K3Q8NGY3 331 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 MFSD8Q8NHS3 518 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ZNF563Q8TA94 476 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CA5BP1Q8WTZ4 195 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ABHD3Q8WU67 409 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 SMPDL3BQ92485 455 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 OSTF1Q92882 214 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 RNFT2Q96EX2 444 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 OR5B2Q96R09 309 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ZNF559Q9BR84 538 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 FUZQ9BT04 418 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 SLC19A3Q9BZV2 496 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 PIGMQ9H3S5 423 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CHST11Q9NPF2 352 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 SERINC1Q9NRX5 453 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 MAN2C1Q9NTJ4 1040 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 NDE1Q9NXR1 346 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 KLHL28Q9NXS3 571 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 B3GAT1Q9P2W7 334 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 UPB1Q9UBR1 384 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 MCTS1Q9ULC4 181 aaKnown RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 CACNA1DQ01668 2161 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CADP27708 2225 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CCDC168Q8NDH2 2452 aa4.59□□□□□ -1.68
VPS45-207ENST00000477558 ROS1P08922 2347 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 VPS13CQ709C8 3753 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 MYO9AB2RTY4 2548 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 NKX2-6A6NCS4 301 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 PDLIM1O00151 329 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 CXCR6O00574 342 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 FFAR1O14842 300 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 RAMP1O60894 148 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 OR5F1O95221 314 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 IFNA14P01570 189 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 OPN1LWP04000 364 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 FGF2P09038 288 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 COX5AP20674 150 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 EDNRAP25101 427 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 CDH12P55289 794 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 COPZ1P61923 177 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 SELENOWP63302 87 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 BNIP2Q12982 314 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 SLC17A1Q14916 467 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 OR1Q1Q15612 314 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 LRRC23Q53EV4 343 aaPredicted RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 ALG10BQ5I7T1 473 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 FAM69AQ5T7M9 428 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 C1orf140Q5VVS0 124 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 TFAP2EQ6VUC0 442 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 FCRLAQ7L513 359 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 RANBP3LQ86VV4 465 aaPredicted RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 CARM1Q86X55 608 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 DEFB107AQ8IZN7 70 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 OFCC1Q8IZS5 231 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 GABRG1Q8N1C3 465 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 CADM2Q8N3J6 435 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 FAM86B1Q8N7N1 296 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 ZIC4Q8N9L1 334 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 SCAIQ8N9R8 606 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 PIGXQ8TBF5 258 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 ADAMTS16Q8TE57 1224 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 LIPHQ8WWY8 451 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 GEMIN6Q8WXD5 167 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 RNASE6Q93091 150 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 TMEM45BQ96B21 275 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 INTS12Q96CB8 462 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 DDIT4LQ96D03 193 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 SLC47A1Q96FL8 570 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 NSL1Q96IY1 281 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 C7orf34Q96L11 122 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 PRRC1Q96M27 445 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 MCHR1Q99705 422 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 KCTD14Q9BQ13 255 aaPredicted RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 SF3B5Q9BWJ5 86 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 CADM1Q9BY67 442 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 UCK2Q9BZX2 261 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 CACYBPQ9HB71 228 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 TIGARQ9NQ88 270 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 PLSCR4Q9NRQ2 329 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 DCAF13Q9NV06 445 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 ALKBH4Q9NXW9 302 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 TAS2R1Q9NYW7 299 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 KLHL9Q9P2J3 617 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 MALT1Q9UDY8 824 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 PRPF19Q9UMS4 504 aaKnown RBP4.58□□□□□ -1.68
VPS45-207ENST00000477558 A4GNTQ9UNA3 340 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 SLC9A8Q9Y2E8 581 aa4.58□□□□□ -1.68
VPS45-207ENST00000477558 ZNF469Q96JG9 3925 aaPredicted RBP4.57□□□□□ -1.68
VPS45-207ENST00000477558 TRAV36DV7A0A075B6V5 113 aa4.57□□□□□ -1.68
VPS45-207ENST00000477558 TRBV5-7A0A0A0MS05 114 aa4.57□□□□□ -1.68
VPS45-207ENST00000477558 TMEM272A0A1B0GTI8 110 aa4.57□□□□□ -1.68
VPS45-207ENST00000477558 TRAPPC13A5PLN9 417 aa4.57□□□□□ -1.68
VPS45-207ENST00000477558 SAC3D1A6NKF1 404 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms