RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CHP2O43745 196 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 TPST2O60704 377 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 FMO6PO60774 539 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF205O95201 554 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 IGHV2-70P01814 119 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 VIMP08670 466 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 RPS2P15880 293 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF12P17014 697 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 TNFRSF1AP19438 455 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 PPIBP23284 216 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 WNT5AP41221 380 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 GUCA1AP43080 201 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 DAP3P51398 398 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 MMP15P51511 669 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 RAG2P55895 527 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 BTG1P62324 171 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 GNB2P62879 340 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 FMODQ06828 376 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 TOP3AQ13472 1001 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ZMYND11Q15326 602 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 RUNDC3AQ59EK9 446 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF613Q6PF04 617 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 C16orf87Q6PH81 154 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 FIP1L1Q6UN15 594 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 BRD3OSQ6XYD6 125 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 HDDC2Q7Z4H3 204 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ALDH16A1Q8IZ83 802 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 C10orf111Q8N326 155 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 BHLHE22Q8NFJ8 381 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 OR4F5Q8NH21 305 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC26A7Q8TE54 656 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ITLN1Q8WWA0 313 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 GTF2H4Q92759 462 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 MARS2Q96GW9 593 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 OR52B2Q96RD2 323 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 WFDC6Q9BQY6 131 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 SSBP3Q9BWW4 388 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 MARCH7Q9H992 704 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 PATZ1Q9HBE1 687 aaKnown RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 BEX1Q9HBH7 125 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 SDR39U1Q9NRG7 319 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 THAP1Q9NVV9 213 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 TAS2R5Q9NYW4 299 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 CGGBP1Q9UFW8 167 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF229Q9UJW7 825 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 CORO2BQ9UQ03 480 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 TET2Q6N021 2002 aaPredicted RBP5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 NOTCH1P46531 2555 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 LOC100509620A0A075B734 347 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 PPIAL4EA0A075B759 164 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 PPIAL4CA0A0B4J2A2 164 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 IGHV3-64DA0A0J9YX35 117 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 FAM181BA6NEQ2 426 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 PPIAL4DF5H284 164 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 TIMM23O14925 209 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 TRMUO75648 421 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ABHD16AO95870 558 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 NGFP01138 241 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MMP7P09237 267 aaPredicted RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 PPIAL4FP0DN26 164 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 BMP2P12643 396 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ACADSP16219 412 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 CD247P20963 164 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 GSTM3P21266 225 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 LIPAP38571 399 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MDH2P40926 338 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC6A9P48067 706 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 PCBP3P57721 371 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 PSG4Q00888 419 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 RPL18Q07020 188 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MPP2Q14168 576 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 CYP51A1Q16850 503 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM155Q4W5P6 130 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 TTMPQ5BVD1 217 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MTX3Q5HYI7 312 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM255AQ5JRV8 349 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MBNL2Q5VZF2 373 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF774Q6NX45 483 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 C1orf94Q6P1W5 598 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ARL9Q6T311 187 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 NHLRC1Q6VVB1 395 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ZER1Q7Z7L7 766 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 OR5AS1Q8N127 324 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MUC20Q8N307 709 aaPredicted RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ATG16L2Q8NAA4 619 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ADAMTS16Q8TE57 1224 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 AENQ8WTP8 325 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 WFDC12Q8WWY7 111 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ASB10Q8WXI3 467 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 POM121L2Q96KW2 1035 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC30A2Q9BRI3 323 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 RSPO3Q9BXY4 272 aaPredicted RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 MMP27Q9H306 513 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 SIAEQ9HAT2 523 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 ELOVL3Q9HB03 270 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 SSU72Q9NP77 194 aaKnown RBP5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 SLCO1B3Q9NPD5 702 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 INIPQ9NRY2 104 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC25A37Q9NYZ2 338 aa5.62□□□□□ -1.51
RTFDC1-206ENST00000477485 CCDC167Q9P0B6 97 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms