RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ASH2LQ9UBL3 628 aa13.82□□□□□ -0.2
CLSTN1-205ENST00000477264 LPAR3Q9UBY5 353 aa13.82□□□□□ -0.2
CLSTN1-205ENST00000477264 C19orf53Q9UNZ5 99 aaPredicted RBP13.82□□□□□ -0.2
CLSTN1-205ENST00000477264 F5P12259 2224 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 TRAV8-7A0A075B6U6 113 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 TVP23AA6NH52 213 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 IDSB3KWA1 339 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 TO15178 435 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 ABHD16AO95870 558 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MT-ND4LP03901 98 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MAS1P04201 325 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 ZNF735P0CB33 412 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 HOXB2P14652 356 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MAGEB1P43366 347 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 SLC6A9P48067 706 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 CYCSP99999 105 aaKnown RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 PLA2G7Q13093 441 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 ATXN7L3Q14CW9 347 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 TMEM52BQ4KMG9 183 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 ADAMTSL4Q6UY14 1074 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 RBMS3Q6XE24 437 aaKnown RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MFSD9Q8NBP5 474 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 OR51D1Q8NGF3 324 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 DVL3Q92997 716 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 FAM3DQ96BQ1 224 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 GABRG3Q99928 467 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 FKRPQ9H9S5 495 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 WIF1Q9Y5W5 379 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 EML5Q05BV3 1969 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 METTL21EPA6NDL7 271 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 ZNF736B4DX44 427 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MFNGO00587 321 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 KLF8O95600 359 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 OR8G3PP0DMU2 310 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MAOAP21397 527 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 TACR3P29371 465 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 CSNK1EP49674 416 aaKnown RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 MRPS21P82921 87 aaKnown RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 NR0B2Q15466 257 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 LINC01590Q5TEZ4 76 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 UNQ6126/PRO20091Q6UXV3 157 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 BPIFB2Q8N4F0 458 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 PHOSPHO1Q8TCT1 267 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 SEH1LQ96EE3 360 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 Q96M85 177 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 ALG12Q9BV10 488 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 SLC17A9Q9BYT1 436 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 TUBA4BQ9H853 241 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 RHOFQ9HBH0 211 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 FLRT3Q9NZU0 649 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 FRRS1LQ9P0K9 344 aa13.81□□□□□ -0.2
CLSTN1-205ENST00000477264 PRUNE2Q8WUY3 3088 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 A0A087WV62 115 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 SYNDIG1LA6NDD5 238 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 OR4C45A6NMZ5 311 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 ZNF729A6NN14 1252 aaPredicted RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 DOK2O60496 412 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 LDB3O75112 727 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 ICOSLGO75144 302 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 CRHP06850 196 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 SDHAP31040 664 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 DRD3P35462 400 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 RPL4P36578 427 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 EFNB2P52799 333 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 SRSF3P84103 164 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 ALG10BQ5I7T1 473 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 PHF19Q5T6S3 580 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 TMEM244Q5VVB8 128 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 EIF5AL1Q6IS14 154 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 ZNF676Q8N7Q3 588 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 MCHR2Q969V1 340 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 TMEM106AQ96A25 262 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 ZC3H10Q96K80 434 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 NMNAT3Q96T66 252 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 ATG5Q9H1Y0 275 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 C6orf106Q9H6K1 298 aaPredicted RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 DHCR7Q9UBM7 475 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 MRM2Q9UI43 246 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 DMRT1Q9Y5R6 373 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
CLSTN1-205ENST00000477264 A0A1W2PP55 124 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 MEIS3P1A6NDR6 274 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 PRR32B1ATL7 298 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 PEX12O00623 359 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 BRINP1O60477 761 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 FARS2O95363 451 aaKnown RBP13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 F12P00748 615 aaPredicted RBP13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 NGFRP08138 427 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 PSMB6P28072 239 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 CX3CR1P49238 355 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 TDGQ13569 410 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 ELOCQ15369 112 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 MST1LQ2TV78 715 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 TEX30Q5JUR7 227 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 PTCRAQ6ISU1 281 aaPredicted RBP13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 LINC00114Q6XXX2 140 aa13.79□□□□□ -0.2
CLSTN1-205ENST00000477264 JAZF1Q86VZ6 243 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms