RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PPP1CBP62140 327 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 TNFAIP6P98066 277 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 HOXA4Q00056 320 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 PLP2Q04941 152 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 SGCAQ16586 387 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF718Q3SXZ3 478 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 RUNDC3AQ59EK9 446 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 FAM209AQ5JX71 171 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 TTC33Q6PID6 262 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 BRD3OSQ6XYD6 125 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 KRT73Q86Y46 540 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 PARP8Q8N3A8 854 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 OR1J2Q8NGS2 313 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 ADAMTS16Q8TE57 1224 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 TMIGD2Q96BF3 282 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 MRPL13Q9BYD1 178 aaKnown RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 MS4A7Q9GZW8 240 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 PATZ1Q9HBE1 687 aaKnown RBP10.06□□□□□ -0.8
HDAC6-219ENST00000476625 CCNB1IP1Q9NPC3 277 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 C20orf141Q9NUB4 165 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 TMEM106BQ9NUM4 274 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 CCDC167Q9P0B6 97 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 SLC13A4Q9UKG4 626 aa10.06□□□□□ -0.8
HDAC6-219ENST00000476625 A0A0G2JK05 382 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 PLSCR5A0PG75 271 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 F5H0A9 414 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 PIP5K1CO60331 668 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 ACADSP16219 412 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 CD247P20963 164 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF84P51523 738 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 IL13RA1P78552 427 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 RELBQ01201 579 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 PSG7Q13046 419 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 TOP3AQ13472 1001 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 MBNL2Q5VZF2 373 aaKnown RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 RUSC1-AS1Q66K80 236 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF774Q6NX45 483 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 NANOGNBQ7Z5D8 188 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 NKAIN4Q8IVV8 208 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 HIPK4Q8NE63 616 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 OR2Z1Q8NG97 314 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF420Q8TAQ5 688 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 ITLN1Q8WWA0 313 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 SLC25A28Q96A46 364 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 PKP2Q99959 881 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 SPATA5L1Q9BVQ7 753 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 C1orf198Q9H425 327 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 MARCH7Q9H992 704 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 SLCO1B3Q9NPD5 702 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-219ENST00000476625 KLHL21Q9UJP4 597 aa10.05□□□□□ -0.8
HDAC6-219ENST00000476625 MCIDASD6RGH6 385 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 M0QX08 132 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 MT-ND5P03915 603 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 SELEP16581 610 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 SLC6A2P23975 617 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 LAP3P28838 519 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 GDI2P50395 445 aaKnown RBP10.04□□□□□ -0.8
HDAC6-219ENST00000476625 CRYBA2P53672 197 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 PRSS12P56730 875 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 PCBP3P57721 371 aaKnown RBP10.04□□□□□ -0.8
HDAC6-219ENST00000476625 MTPNP58546 118 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 PAX2Q02962 417 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 DEFB112Q30KQ8 113 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 MMEL1Q495T6 779 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 C10orf128Q5T292 105 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 ARMC4Q5T2S8 1044 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 SWT1Q5T5J6 900 aaKnown RBP10.04□□□□□ -0.8
HDAC6-219ENST00000476625 HIST2H2BDQ6DRA6 164 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF613Q6PF04 617 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 RHOUQ7L0Q8 258 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 IGFN1Q86VF2 1251 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 MREGQ8N565 214 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 C19orf18Q8NEA5 215 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 OR52E2Q8NGJ4 325 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 TMEM255BQ8WV15 326 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 SLC7A6Q92536 515 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 TAMM41Q96BW9 452 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 SEPHS2Q99611 448 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 MRI1Q9BV20 369 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 OR2H1Q9GZK4 316 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 EGLN1Q9GZT9 426 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 LRMDAQ9H2I8 198 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 TMEM38AQ9H6F2 299 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 ZNF229Q9UJW7 825 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 USH1CQ9Y6N9 552 aa10.04□□□□□ -0.8
HDAC6-219ENST00000476625 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
HDAC6-219ENST00000476625 PRORSD1PA6NEY8 169 aa10.03□□□□□ -0.8
HDAC6-219ENST00000476625 CEACAM18A8MTB9 384 aa10.03□□□□□ -0.8
HDAC6-219ENST00000476625 H7C1C5 153 aa10.03□□□□□ -0.8
HDAC6-219ENST00000476625 TIMM8AO60220 97 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-219ENST00000476625 CYB5R3P00387 301 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-219ENST00000476625 PTHP01270 115 aa10.03□□□□□ -0.8
HDAC6-219ENST00000476625 CD55P08174 381 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms