RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ASF1BQ9NVP2 202 aa16.03■□□□□ 0.16
ATG4B-217ENST00000475693 DOCK7Q96N67 2140 aa16.03■□□□□ 0.16
ATG4B-217ENST00000475693 NBASA2RRP1 2371 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 IGLV1-36A0A0B4J1U3 117 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SLC22A31A6NKX4 558 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 AQP7O14520 342 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 GLCEO94923 617 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SYNGR4O95473 234 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 HLA-DQA2P01906 255 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SBK2P0C263 348 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SLC25A1P53007 311 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 RAB40BQ12829 278 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 ARMCX4Q5H9R4 360 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SPANXN2Q5MJ10 180 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 RPUSD3Q6P087 351 aaKnown RBP16.02■□□□□ 0.16
ATG4B-217ENST00000475693 ZGRF1Q86YA3 2104 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 OR6X1Q8NH79 312 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SETD6Q8TBK2 473 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 RNF128Q8TEB7 428 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 SIAEQ9HAT2 523 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 COPS3Q9UNS2 423 aa16.02■□□□□ 0.16
ATG4B-217ENST00000475693 MED12LQ86YW9 2145 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 C12orf71A8MTZ7 269 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 J3QRE1 110 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 UPK3AO75631 287 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 ZNF432O94892 652 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 VAMP5O95183 116 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 QDPRP09417 244 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 PIPP12273 146 aaPredicted RBP16.02■□□□□ 0.15
ATG4B-217ENST00000475693 FAM180AQ6UWF9 173 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 GCNT2Q8N0V5 402 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 RPRMLQ8N4K4 120 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 MCHR2Q969V1 340 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 ZNF486Q96H40 463 aaPredicted RBP16.02■□□□□ 0.15
ATG4B-217ENST00000475693 ZNF649Q9BS31 505 aa16.02■□□□□ 0.15
ATG4B-217ENST00000475693 MRPS18AQ9NVS2 196 aaKnown RBP16.02■□□□□ 0.15
ATG4B-217ENST00000475693 MRPL22Q9NWU5 206 aaKnown RBP16.02■□□□□ 0.15
ATG4B-217ENST00000475693 MCTS1Q9ULC4 181 aaKnown RBP16.02■□□□□ 0.15
ATG4B-217ENST00000475693 EXOGQ9Y2C4 368 aaKnown RBP16.02■□□□□ 0.15
ATG4B-217ENST00000475693 A6NIZ1 184 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 SNTNA6NMZ2 147 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 LRRTM2O43300 516 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 DNPH1O43598 174 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 RAB36O95755 333 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 IGHG1P01857 330 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 LIMS3P0CW19 117 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 LIMS4P0CW20 117 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 RAP1BP61224 184 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 RAP1AP62834 184 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 KLHL22Q53GT1 634 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 AGAP6Q5VW22 663 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 CCBE1Q6UXH8 406 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-217ENST00000475693 TMEM123Q8N131 208 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 NOXO1Q8NFA2 376 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 OR2T4Q8NH00 348 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 GPR137Q96N19 417 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 PRDM14Q9GZV8 571 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 RACGAP1Q9H0H5 632 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 ISG20L2Q9H9L3 353 aaKnown RBP16.01■□□□□ 0.15
ATG4B-217ENST00000475693 KLHDC2Q9Y2U9 406 aa16.01■□□□□ 0.15
ATG4B-217ENST00000475693 A0A1W2PQL4 384 aaPredicted RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 PRR32B1ATL7 298 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 HSMCR30P0CW71 290 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 POU4F3Q15319 338 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 GDPD3Q7L5L3 318 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 LINGO2Q7L985 606 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 NUFIP2Q7Z417 695 aaKnown RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 OR6N1Q8NGY5 312 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 GATAD2BQ8WXI9 593 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 FGF20Q9NP95 211 aaPredicted RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 CRNNQ9UBG3 495 aaPredicted RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 DIMT1Q9UNQ2 313 aaKnown RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 GRIP1Q9Y3R0 1128 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 COL6A6A6NMZ7 2263 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 NPIPB13A6NJU9 1138 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 SLC22A20A6NK97 555 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 NPIPB4C9JG80 1138 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 MED22Q15528 200 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 ZNF324BQ6AW86 544 aaPredicted RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 RPTNQ6XPR3 784 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 AAED1Q7RTV5 226 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 IL17RDQ8NFM7 739 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 SF3B5Q9BWJ5 86 aaKnown RBP16■□□□□ 0.15
ATG4B-217ENST00000475693 OR51E2Q9H255 320 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 C12orf49Q9H741 205 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 CACNA1BQ00975 2339 aa16■□□□□ 0.15
ATG4B-217ENST00000475693 CRYABP02511 175 aaKnown RBP15.99■□□□□ 0.15
ATG4B-217ENST00000475693 ZNF85Q03923 595 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 PCSK4Q6UW60 755 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 GDPGP1Q6ZNW5 385 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 DPY19L4Q7Z388 723 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 SARAFQ96BY9 339 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 ALKBH3Q96Q83 286 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-217ENST00000475693 RBP7Q96R05 134 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 SEC61A2Q9H9S3 476 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 ERVK13-1Q9NX77 482 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 FKBP7Q9Y680 259 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 RTTNQ86VV8 2226 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 A0A1W2PPL8 197 aa15.99■□□□□ 0.15
ATG4B-217ENST00000475693 TPOP07202 933 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms