RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ABHD16AO95870 558 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 PDGFAP04085 211 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 HLA-DPB1P04440 258 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 EDNRAP25101 427 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 TGFBR1P36897 503 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 SERPINB10P48595 397 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 TGM4P49221 684 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 TUBA1BP68363 451 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 SIRPAP78324 504 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 LSAMPQ13449 338 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 CDK5R1Q15078 307 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 RNPS1Q15287 305 aaKnown RBP12.17□□□□□ -0.46
TRAF4-210ENST00000475329 KCNMB1Q16558 191 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 TBR1Q16650 682 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 SOWAHCQ53LP3 525 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-210ENST00000475329 OTPQ5XKR4 325 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 DMKNQ6E0U4 476 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-210ENST00000475329 RPL22L1Q6P5R6 122 aaKnown RBP12.17□□□□□ -0.46
TRAF4-210ENST00000475329 LRFN4Q6PJG9 635 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 CD200R1LQ6Q8B3 271 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 RPTNQ6XPR3 784 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 TUBA1AQ71U36 451 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 OR52N5Q8NH56 324 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 CNTNAP3BQ96NU0 1288 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 OR8B4Q96RC9 309 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 AMELYQ99218 206 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 TM9SF2Q99805 663 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 ABHD6Q9BV23 337 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 CNTNAP3Q9BZ76 1288 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 ULBP2Q9BZM5 246 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 SEC61A2Q9H9S3 476 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 B3GAT2Q9NPZ5 323 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 ING1Q9UK53 422 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-210ENST00000475329 POLR1DQ9Y2S0 133 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 GRIP1Q9Y3R0 1128 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 UGT2A1Q9Y4X1 527 aa12.17□□□□□ -0.46
TRAF4-210ENST00000475329 DHHO43323 396 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 CD1AP06126 327 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 GALP22466 123 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 FGF9P31371 208 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 PSMB10P40306 273 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 GDI2P50395 445 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 ZNF84P51523 738 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 FABP5Q01469 135 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 ROM1Q03395 351 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 DGUOKQ16854 277 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 PHYHD1Q5SRE7 291 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 LIPNQ5VXI9 398 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 RPUSD3Q6P087 351 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 FOXL2NBQ6ZUU3 175 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 KRT77Q7Z794 578 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 SIAH3Q8IW03 269 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 MCEMP1Q8IX19 187 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 ZNF679Q8IYX0 411 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 GPR137CQ8N3F9 429 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 RBMXL3Q8N7X1 1067 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 FNDC9Q8TBE3 224 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 ZNF775Q96BV0 537 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 SMIM19Q96E16 107 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 CDADC1Q9BWV3 514 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 RNF122Q9H9V4 155 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 TXNL4BQ9NX01 149 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 SLCO1C1Q9NYB5 712 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 CCDC59Q9P031 241 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 B3GNT3Q9Y2A9 372 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 GSTK1Q9Y2Q3 226 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 NOSIPQ9Y314 301 aaKnown RBP12.16□□□□□ -0.46
TRAF4-210ENST00000475329 ZNF175Q9Y473 711 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 ACACAQ13085 2346 aa12.16□□□□□ -0.46
TRAF4-210ENST00000475329 TRBV2A0A0J9YWF9 115 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 ZNF724A8MTY0 619 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 K7EM74 188 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 GABRPO00591 440 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 LRRTM2O43300 516 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 GPRIN2O60269 458 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 UPK3AO75631 287 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 RPP14O95059 124 aaKnown RBP12.15□□□□□ -0.46
TRAF4-210ENST00000475329 FCGR2AP12318 317 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 CDAP32320 146 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 RIDAP52758 137 aaKnown RBP12.15□□□□□ -0.46
TRAF4-210ENST00000475329 C22orf42Q6IC83 251 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 LRRN1Q6UXK5 716 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 DCXRQ7Z4W1 244 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 LINC00346Q8IVM7 164 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 MS4A15Q8N5U1 240 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 OR2AJ1Q8NGZ0 328 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 RPS4Y2Q8TD47 263 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 SARAFQ96BY9 339 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 PGLYRP3Q96LB9 341 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 KCTD7Q96MP8 289 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 TAAR6Q96RI8 345 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms