RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 KPTNQ9Y664 436 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 PRUNE2Q8WUY3 3088 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 IGKV1D-42A0A075B6H8 117 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SMIM30A4D0T7 59 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 A6NJY4 79 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 KIAA1324LA8MWY0 1029 aaPredicted RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 DLEU1O43261 78 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 IFNA17P01571 189 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ANXA4P09525 319 aaPredicted RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 F3P13726 295 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 TBPP20226 339 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ADH6P28332 368 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ACVR1BP36896 505 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 HMGCS2P54868 508 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 RAB8AP61006 207 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 GABREP78334 506 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZNF117Q03924 483 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 CHIT1Q13231 466 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 RUNX2Q13950 521 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SLC9A5Q14940 896 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 CCDC157Q569K6 752 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 NXPE4Q6UWF7 544 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 RPTNQ6XPR3 784 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 CEACAM19Q7Z692 300 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 METTL23Q86XA0 190 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZNF573Q86YE8 665 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 DCAF4L2Q8NA75 395 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 OR2G2Q8NGZ5 317 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 TMEM255BQ8WV15 326 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 FCAMRQ8WWV6 532 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 PPCDCQ96CD2 204 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZG16BQ96DA0 208 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZFP42Q96MM3 310 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 C20orf144Q9BQM9 153 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SYT4Q9H2B2 425 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SPENQ96T58 3664 aaKnown RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 GTF3C1Q12789 2109 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 A0A0A6YYD4 124 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 OR2AT4A6NND4 320 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 UPK3BL1B0FP48 263 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 UPK3BL2E5RIL1 263 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 H3BRB1 525 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SLC17A2O00624 439 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 TAAR5O14804 337 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SYT7O43581 403 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 NUDT21O43809 227 aaKnown RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 NME6O75414 186 aaPredicted RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 REM1O75628 298 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 STC2O76061 302 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 IGHG1P01857 330 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 PIRTP0C851 137 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 IRF1P10914 325 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZNF708P17019 499 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 NDUFV2P19404 249 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SPINT3P49223 89 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 CCR4P51679 360 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 RPS13P62277 151 aaKnown RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 ACTA2P62736 377 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ACTG2P63267 376 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SORDQ00796 357 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SLC3A1Q07837 685 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ALKBH1Q13686 389 aaKnown RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 SWI5Q1ZZU3 235 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 C1orf194Q5T5A4 169 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 PRSS57Q6UWY2 283 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SLC39A5Q6ZMH5 540 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZNF836Q6ZNA1 936 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 TMEM144Q7Z5S9 345 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ZNF546Q86UE3 836 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 PPP1R3BQ86XI6 285 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 OR2T33Q8NG76 320 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 OR2A12Q8NGT7 310 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 MRPS31Q92665 395 aaKnown RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 SLAMF9Q96A28 289 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 DACT3Q96B18 629 aaPredicted RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 ZNF524Q96C55 264 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 LRIG1Q96JA1 1093 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SLC6A7Q99884 636 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ADGRE3Q9BY15 652 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 ELAC1Q9H777 363 aaKnown RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 PTGES2Q9H7Z7 377 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 SAGE1Q9NXZ1 904 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 FLRT3Q9NZU0 649 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 DOK5Q9P104 306 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 TP53TG3Q9ULZ0 132 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 FBXO7Q9Y3I1 522 aa3.67□□□□□ -1.82
USP16-205ENST00000474835 PCYT1BQ9Y5K3 369 aaPredicted RBP3.67□□□□□ -1.82
USP16-205ENST00000474835 A6NLC8 198 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 NRG2O14511 850 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 GOSR2O14653 212 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CTSVO60911 334 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 PFN1P07737 140 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 SEC11BP0C7V7 166 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 METTL15P1P0C7V9 234 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 HOXB2P14652 356 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 PPT1P50897 306 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 RAB5BP61020 215 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 DDX39BQ13838 428 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 GAMTQ14353 236 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 MEF2DQ14814 521 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms