RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 GEMIN6Q8WXD5 167 aaKnown RBP11.86□□□□□ -0.51
CCDC78-209ENST00000474647 DVL3Q92997 716 aaPredicted RBP11.86□□□□□ -0.51
CCDC78-209ENST00000474647 EGLN1Q9GZT9 426 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 EIF3KQ9UBQ5 218 aaKnown RBP11.86□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF229Q9UJW7 825 aa11.86□□□□□ -0.51
CCDC78-209ENST00000474647 VWFP04275 2813 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 TRBV5-3A0A0A0MS03 114 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 C5orf49A4QMS7 147 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 FOXH1O75593 365 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 SLC2A10O95528 541 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 THY1P04216 161 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 MMP7P09237 267 aaPredicted RBP11.85□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF32P17041 273 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 GPX2P18283 190 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 CDAP32320 146 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 MMP15P51511 669 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 DEFA6Q01524 100 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 KLF10Q13118 480 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 DUSP7Q16829 419 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 CYP51A1Q16850 503 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 RBM45Q8IUH3 476 aaKnown RBP11.85□□□□□ -0.51
CCDC78-209ENST00000474647 AKR7LQ8NHP1 331 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 ABHD4Q8TB40 342 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 DCLRE1CQ96SD1 692 aaKnown RBP11.85□□□□□ -0.51
CCDC78-209ENST00000474647 CPPED1Q9BRF8 314 aaPredicted RBP11.85□□□□□ -0.51
CCDC78-209ENST00000474647 OR2J1Q9GZK6 312 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 CAPN7Q9Y6W3 813 aa11.85□□□□□ -0.51
CCDC78-209ENST00000474647 TRAPPC13A5PLN9 417 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 UBOX5O94941 541 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ASAH2BP0C7U1 165 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ACADSP16219 412 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 PRTN3P24158 256 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ZFP36P26651 326 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 WNT5AP41221 380 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 GDI2P50395 445 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ERVK-25P63136 954 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 RPL18Q07020 188 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 BAMBIQ13145 260 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 SGCAQ16586 387 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 NRN1LQ496H8 165 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 PDLIM3Q53GG5 364 aaPredicted RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 AGKQ53H12 422 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 UNQ6126/PRO20091Q6UXV3 157 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 RFPL4BQ6ZWI9 263 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 HDDC2Q7Z4H3 204 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 C11orf65Q8NCR3 313 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 GPR32P1Q8NGA4 272 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 OR4D11Q8NGI4 311 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ASB10Q8WXI3 467 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 NSMAFQ92636 917 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 POP5Q969H6 163 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 MARS2Q96GW9 593 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 UNKLQ9H9P5 680 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ARMCX1Q9P291 453 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 ZNF69Q9UC07 566 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
CCDC78-209ENST00000474647 NUP50Q9UKX7 468 aa11.84□□□□□ -0.51
CCDC78-209ENST00000474647 TRMUO75648 421 aaKnown RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 LYPD3O95274 346 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 SBK2P0C263 348 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 CD247P20963 164 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 RBMXP38159 391 aaKnown RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 DAP3P51398 398 aaKnown RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 PCBP3P57721 371 aaKnown RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 SEC61A1P61619 476 aaKnown RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 FMODQ06828 376 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 CD47Q08722 323 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 MAPRE2Q15555 327 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 SPRNQ5BIV9 151 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 DOK3Q7L591 496 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 TSPYL5Q86VY4 417 aaPredicted RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 PTOV1Q86YD1 416 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 KLHL36Q8N4N3 616 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 DEFB108BQ8NET1 73 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 SLC26A7Q8TE54 656 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 TSPEARQ8WU66 669 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 LRRC58Q96CX6 371 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 GPA33Q99795 319 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 MRI1Q9BV20 369 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 ZMAT3Q9HA38 289 aaKnown RBP11.83□□□□□ -0.52
CCDC78-209ENST00000474647 SIAEQ9HAT2 523 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 MSL2Q9HCI7 577 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 INIPQ9NRY2 104 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 CYSLTR2Q9NS75 346 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 DCAF16Q9NXF7 216 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 AUP1Q9Y679 476 aa11.83□□□□□ -0.52
CCDC78-209ENST00000474647 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 M0QX08 132 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 TIMM8AO60220 97 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MGRN1O60291 552 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 IGHMP01871 453 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms