RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SDHBP21912 280 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HOXD9P28356 352 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 EPHA2P29317 976 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HSD17B3P37058 310 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 PNPLA4P41247 253 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CDKN2BP42772 138 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FKBP3Q00688 224 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 MGAT2Q10469 447 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF74Q16587 644 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HIF1AQ16665 826 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CPTPQ5TA50 214 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HIST2H2BCQ6DN03 193 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HIST2H2BDQ6DRA6 164 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FAM71E1Q6IPT2 247 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF474Q6S9Z5 364 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 FAM131AQ6UXB0 335 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 SYT12Q8IV01 421 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 GALNT16Q8N428 558 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR4D9Q8NGE8 314 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR5P2Q8WZ92 322 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 MOCOSQ96EN8 888 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZC3HAV1LQ96H79 300 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 ADGRG7Q96K78 797 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 Q96MT0 163 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 TP53RKQ96S44 253 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZSWIM1Q9BR11 485 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CDC42EP4Q9H3Q1 356 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 SLC6A20Q9NP91 592 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 TMPRSS4Q9NRS4 437 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 PRSS50Q9UI38 385 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF107Q9UII5 783 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 CMAHPQ9Y471 501 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CNTNAP4Q9C0A0 1308 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZMYM2Q9UBW7 1377 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ABCC5O15440 1437 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 NSD3Q9BZ95 1437 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CROCCQ5TZA2 2017 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 REREQ9P2R6 1566 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 KBTBD11-OT1A0A1B0GTJ5 212 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FTCDNL1E5RQL4 147 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 TNFSF11O14788 317 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 SERPINA7P05543 415 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FAHP16930 419 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CERS1P27544 350 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 EPHA3P29320 983 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ETV6P41212 452 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 MNDAP41218 407 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 BIDP55957 195 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR10A3P58181 314 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 GAGE5Q13069 117 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 GAGE6Q13070 117 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CDH18Q13634 790 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 MAD2L1BPQ15013 274 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 LINC01620Q4KN68 170 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FFAR4Q5NUL3 377 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 SAMD4BQ5PRF9 694 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF517Q6ZMY9 492 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 H2BFWTQ7Z2G1 175 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 DEFB128Q7Z7B8 93 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ADGRE4PQ86SQ3 457 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 LAS2Q8IYD9 372 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF808Q8N4W9 903 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 SLC30A7Q8NEW0 376 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR4S1Q8NGB4 309 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR56A4Q8NGH8 313 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR13C8Q8NGS7 320 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR2G2Q8NGZ5 317 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FAM45AQ8TCE6 357 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ASB10Q8WXI3 467 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 GALMQ96C23 342 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 SLC35G5Q96KT7 338 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 MRGPRX2Q96LB1 330 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 OR7D2Q96RA2 312 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 NODALQ96S42 347 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 C20orf144Q9BQM9 153 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 DPAGT1Q9H3H5 408 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 LRRC4CQ9HCJ2 640 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 GP6Q9HCN6 339 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HINT3Q9NQE9 182 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 C20orf141Q9NUB4 165 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 IL17CQ9P0M4 197 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 P2RX2Q9UBL9 471 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 PEMTQ9UBM1 199 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CLN8Q9UBY8 286 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 METP08581 1390 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 TRIP11Q15643 1979 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 A0A087WXM4 84 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 RNF222A6NCQ9 220 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 NKX2-6A6NCS4 301 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF840PA6NDX5 716 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 A8MVM7 634 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 ZNF587BE7ETH6 402 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 FAAHO00519 579 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 UBFD1O14562 309 aaKnown RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 P2RX6O15547 441 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 HPRT1P00492 218 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 CFDP00746 253 aaPredicted RBP3.12□□□□□ -1.91
UBR3-208ENST00000474426 APODP05090 189 aa3.12□□□□□ -1.91
UBR3-208ENST00000474426 PRKCGP05129 697 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms