RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 OR2T4Q8NH00 348 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 FGFBP3Q8TAT2 258 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 NRGNQ92686 78 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 OTULINQ96BN8 352 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 PLEKHA8Q96JA3 519 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 RACGAP1Q9H0H5 632 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 LIME1Q9H400 295 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 NOX3Q9HBY0 568 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 EMC7Q9NPA0 242 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 CMC2Q9NRP2 79 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 B9D1Q9UPM9 204 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 MOKQ9UQ07 419 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 FKBP7Q9Y680 259 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 ATP23Q9Y6H3 246 aa10.8□□□□□ -0.68
DDX56-209ENST00000473924 NBPF19A0A087WUL8 3843 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 IGLV1-36A0A0B4J1U3 117 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 CYSRT1A8MQ03 144 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 FAM171A2A8MVW0 826 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ATP6V1G2-DDX39BF2Z307 99 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 DCTN6O00399 190 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 HS3ST1O14792 307 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 MITFO75030 526 aaPredicted RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 PTHP01270 115 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 HLA-DQA2P01906 255 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 HMGN1P05114 100 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ZNF14P17017 642 aaPredicted RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 ZNF32P17041 273 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 PAICSP22234 425 aaKnown RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 ESRRGP62508 458 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 CDK5Q00535 292 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 KEAP1Q14145 624 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ZNF672Q499Z4 452 aaPredicted RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 TMEM236Q5W0B7 351 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 KDM4DQ6B0I6 523 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ACSM5Q6NUN0 579 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 CDH24Q86UP0 819 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 MYPOPQ86VE0 399 aaPredicted RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 ALDH16A1Q8IZ83 802 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 PQLC1Q8N2U9 271 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 PROKR2Q8NFJ6 384 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 IL17RDQ8NFM7 739 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 OR10H5Q8NGA6 315 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 OR9Q1Q8NGQ5 310 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 NEUROG1Q92886 237 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 FBXW5Q969U6 566 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 FBXO17Q96EF6 278 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 CIB1Q99828 191 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 RBM4BQ9BQ04 359 aaKnown RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 RBM4Q9BWF3 364 aaKnown RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 ZNF416Q9BWM5 594 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 OSBPL10Q9BXB5 764 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 CISD1Q9NZ45 108 aaKnown RBP10.79□□□□□ -0.68
DDX56-209ENST00000473924 POLR1DQ9Y2S0 133 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 TIMM10BQ9Y5J6 103 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ORC6Q9Y5N6 252 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ABCA12Q86UK0 2595 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 ABCA4P78363 2273 aa10.79□□□□□ -0.68
DDX56-209ENST00000473924 MPZL1O95297 269 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 GPANK1O95872 356 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 SERPINA5P05154 406 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 SCG5P05408 212 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 MMP7P09237 267 aaPredicted RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 DNASE1P24855 282 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 PYCR1P32322 319 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 LSM6P62312 80 aaKnown RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 PPP2R2BQ00005 443 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 DBPQ10586 325 aaPredicted RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 PTGES3Q15185 160 aaKnown RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 PABPC1L2AQ5JQF8 200 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 ZNF362Q5T0B9 420 aaPredicted RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 OTPQ5XKR4 325 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 UGT2A3Q6UWM9 527 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 PAMR1Q6UXH9 720 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 ZBTB46Q86UZ6 589 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 ZNF611Q8N823 705 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 LILRB1Q8NHL6 650 aaPredicted RBP10.78□□□□□ -0.68
DDX56-209ENST00000473924 C11orf40Q8WZ69 217 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 ZNF75AQ96N20 296 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 WACQ9BTA9 647 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 C9orf16Q9BUW7 83 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 CDADC1Q9BWV3 514 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 PRRG3Q9BZD7 231 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 C1orf198Q9H425 327 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 SLC25A19Q9HC21 320 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 TVP23BQ9NYZ1 205 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 ST6GALNAC2Q9UJ37 374 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 PLEKHA6Q9Y2H5 1048 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 FBN2P35556 2912 aa10.78□□□□□ -0.68
DDX56-209ENST00000473924 APCP25054 2843 aa10.77□□□□□ -0.68
DDX56-209ENST00000473924 IGHV2OR16-5A0A0B4J2B6 119 aa10.77□□□□□ -0.69
DDX56-209ENST00000473924 FAM183AA6NL82 134 aa10.77□□□□□ -0.69
DDX56-209ENST00000473924 PRR23D1E9PI22 279 aaPredicted RBP10.77□□□□□ -0.69
DDX56-209ENST00000473924 EI24O14681 340 aa10.77□□□□□ -0.69
DDX56-209ENST00000473924 SURF4O15260 269 aa10.77□□□□□ -0.69
DDX56-209ENST00000473924 RAF1P04049 648 aa10.77□□□□□ -0.69
DDX56-209ENST00000473924 GYPBP06028 91 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms