RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OR52E4Q8NGH9 312 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR4D11Q8NGI4 311 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR52E1Q8NGJ3 308 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR9A1PQ8NGU1 263 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR10A6Q8NH74 314 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR5AK3PQ8NH89 298 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR5K2Q8NHB8 316 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CCL4L1Q8NHW4 92 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CDC26Q8NHZ8 85 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 FBXO30Q8TB52 745 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CXorf40AQ8TE69 158 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZFP90Q8TF47 636 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 C16orf78Q8WTQ4 265 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SKA2Q8WVK7 121 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ASZ1Q8WWH4 475 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DNASE1L2Q92874 299 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MAL2Q969L2 176 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TMBIM1Q969X1 311 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TSACCQ96A04 125 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RAB7BQ96AH8 199 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM159Q96B96 161 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TESCQ96BS2 214 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TAMM41Q96BW9 452 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 BIRC7Q96CA5 298 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OTUB1Q96FW1 271 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CMTM7Q96FZ5 175 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PPP1R16AQ96I34 528 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 BMFQ96LC9 184 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CNBD2Q96M20 576 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 C12orf66Q96MD2 445 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NSMCE2Q96MF7 247 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 BTBD9Q96Q07 612 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR2M4Q96R27 311 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SERPINI1Q99574 410 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SEPHS2Q99611 448 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CDCA3Q99618 268 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CIB1Q99828 191 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CCT7Q99832 543 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HOPXQ9BPY8 73 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 WFDC6Q9BQY6 131 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CENPKQ9BS16 269 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TIMM29Q9BSF4 260 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CCM2Q9BSQ5 444 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TBCDQ9BTW9 1192 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ACAT2Q9BWD1 397 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HELZ2Q9BYK8 2649 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DPY30Q9C005 99 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RHBGQ9H310 441 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR51B5Q9H339 312 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DPEP2Q9H4A9 486 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ELOVL6Q9H5J4 265 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 XKR8Q9H6D3 395 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 KAT8Q9H7Z6 458 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 UBE2ZQ9H832 354 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ACTR8Q9H981 624 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 EFCAB1Q9HAE3 211 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DYRK4Q9NR20 520 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CYTL1Q9NRR1 136 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IMP3Q9NV31 184 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 EXD2Q9NVH0 621 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ARMC1Q9NVT9 282 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 C1orf109Q9NX04 203 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 FBXL12Q9NXK8 326 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CLEC5AQ9NY25 188 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SPATA7Q9P0W8 599 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 APOBEC3BQ9UH17 382 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TAC3Q9UHF0 121 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF639Q9UID6 485 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ABCG2Q9UNQ0 655 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 AURKCQ9UQB9 309 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 EIF3LQ9Y262 564 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 WDR83OSQ9Y284 106 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ASF1AQ9Y294 204 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SLC17A4Q9Y2C5 497 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TDRKHQ9Y2W6 561 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MRPS2Q9Y399 296 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TMED5Q9Y3A6 229 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SELENOKQ9Y6D0 94 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 FAM208BQ5VWN6 2430 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SPG11Q96JI7 2443 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TENM4Q6N022 2769 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DSCAMO60469 2012 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TET2Q6N021 2002 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 USP9YO00507 2555 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MXRA5Q9NR99 2828 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PLXNB1O43157 2135 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 YLPM1P49750 1951 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH2Q9P225 4427 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PRKDCP78527 4128 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TNCP24821 2201 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MED13LQ71F56 2210 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NPIPA5A0A0B4J1W7 369 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 IGHV1OR15-9A0A0B4J2B8 117 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GNG14A0A1W2PPG7 69 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PQ72 361 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM64A6NGJ6 449 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF860A6NHJ4 632 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 WASHC1A8K0Z3 465 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GABRR3A8MPY1 467 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NPIPA7E9PJI5 369 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms