RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CLRN1P58418 232 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PPP1CBP62140 327 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 TNFAIP6P98066 277 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 HSF2Q03933 536 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 RPL18Q07020 188 aaKnown RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PSG7Q13046 419 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 ENTPD8Q5MY95 495 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 C16orf87Q6PH81 154 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 BRD3OSQ6XYD6 125 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PTOV1Q86YD1 416 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 TREML1Q86YW5 311 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PARP8Q8N3A8 854 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 NOXO1Q8NFA2 376 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 OR52E2Q8NGJ4 325 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 MOSPD2Q8NHP6 518 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 VANGL1Q8TAA9 524 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 ABHD4Q8TB40 342 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 ASB10Q8WXI3 467 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 NSMAFQ92636 917 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 HDAC2Q92769 488 aaKnown RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 DACT3Q96B18 629 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 GPA33Q99795 319 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PRSS27Q9BQR3 290 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 MS4A7Q9GZW8 240 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 RAD21L1Q9H4I0 556 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 NANSQ9NR45 359 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 SLC7A7Q9UM01 511 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PLSCR5A0PG75 271 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 A8MXK9 166 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 BLOC1S5-TXNDC5H3BN57 136 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 CHP2O43745 196 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 IGHG1P01857 330 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 MT-ND5P03915 603 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 FUT1P19526 365 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 FUT4P22083 530 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 GCH1P30793 250 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 AQP2P41181 271 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 CDK5R2Q13319 367 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 SELPLGQ14242 412 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 MOGQ16653 247 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ARMC4Q5T2S8 1044 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 SWT1Q5T5J6 900 aaKnown RBP10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF774Q6NX45 483 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF613Q6PF04 617 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 RANBP3LQ86VV4 465 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-209ENST00000473421 KRT73Q86Y46 540 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ARMC8Q8IUR7 673 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 POU5F2Q8N7G0 328 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF283Q8N7M2 679 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 GOLGA6L1Q8N7Z2 621 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 PFN4Q8NHR9 129 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ADAMTS16Q8TE57 1224 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 OR2H1Q9GZK4 316 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 LRMDAQ9H2I8 198 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 CENPHQ9H3R5 247 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 ZMAT3Q9HA38 289 aaKnown RBP10.57□□□□□ -0.72
TRAF4-209ENST00000473421 SIAEQ9HAT2 523 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 SLCO1B3Q9NPD5 702 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 C20orf141Q9NUB4 165 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 THAP1Q9NVV9 213 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 MMP24Q9Y5R2 645 aa10.57□□□□□ -0.72
TRAF4-209ENST00000473421 TRAV40A0A0B4J280 105 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 IGHV3-64DA0A0J9YX35 117 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 CEACAM18A8MTB9 384 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 M0QX08 132 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 PTHP01270 115 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 WNT2P09544 360 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 ACADSP16219 412 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 GPX2P18283 190 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 CRYBA2P53672 197 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 PCBP3P57721 371 aaKnown RBP10.56□□□□□ -0.72
TRAF4-209ENST00000473421 BTG1P62324 171 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 MRPS34P82930 218 aaKnown RBP10.56□□□□□ -0.72
TRAF4-209ENST00000473421 HOXA4Q00056 320 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-209ENST00000473421 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 SGCAQ16586 387 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 OCLNQ16625 522 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 NRN1LQ496H8 165 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 RUNDC3AQ59EK9 446 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 FAM201AQ5SY85 155 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 C10orf128Q5T292 105 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 OTPQ5XKR4 325 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 C9orf139Q6ZV77 190 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 DPPA2Q7Z7J5 298 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 HIPK4Q8NE63 616 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 ITLN1Q8WWA0 313 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 DIRC2Q96SL1 478 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 CITED1Q99966 193 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 MRI1Q9BV20 369 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 SPATA5L1Q9BVQ7 753 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 EGLN1Q9GZT9 426 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 TMEM38AQ9H6F2 299 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 MARCH7Q9H992 704 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 C1RLQ9NZP8 487 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF229Q9UJW7 825 aa10.56□□□□□ -0.72
TRAF4-209ENST00000473421 DOCK11Q5JSL3 2073 aa10.55□□□□□ -0.72
TRAF4-209ENST00000473421 KNG1P01042 644 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms