RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 PLA1AQ53H76 456 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 TMEM69Q5SWH9 247 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 HES5Q5TA89 166 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 C3orf33Q6P1S2 294 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 TMEM81Q6P7N7 255 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 KLHL24Q6TFL4 600 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 OPN5Q6U736 354 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 ZNF704Q6ZNC4 412 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 SLC35D2Q76EJ3 337 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 BTN2A1Q7KYR7 527 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 FCRLAQ7L513 359 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 LINGO2Q7L985 606 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 LUZP2Q86TE4 346 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 TMPRSS12Q86WS5 348 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 PLCZ1Q86YW0 608 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 CMTM4Q8IZR5 234 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 OR4K17Q8NGC6 315 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 OR56B4Q8NH76 319 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 GRPEL2Q8TAA5 225 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 ASB10Q8WXI3 467 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 YIPF5Q969M3 257 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 ZBTB8AQ96BR9 441 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 UPRTQ96BW1 309 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 FOXRED1Q96CU9 486 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 HAVCR1Q96D42 359 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 ABHD1Q96SE0 405 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 WDR77Q9BQA1 342 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 SLC25A18Q9H1K4 315 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 MED28Q9H204 178 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 LIN7BQ9HAP6 207 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 DIABLOQ9NR28 239 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 SLCO1C1Q9NYB5 712 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 NUFIP1Q9UHK0 495 aaKnown RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 POU2F3Q9UKI9 436 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 ING4Q9UNL4 249 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 DHDHQ9UQ10 334 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 RPH3AQ9Y2J0 694 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 MRPS7Q9Y2R9 242 aaKnown RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 KLHDC2Q9Y2U9 406 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 HDGFL3Q9Y3E1 203 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 WIF1Q9Y5W5 379 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 R4GMQ9 66 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 U3KQA8 63 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 BRWD1Q9NSI6 2320 aa6.85□□□□□ -1.31
CCDC171-205ENST00000472806 MKI67P46013 3256 aaKnown RBP6.85□□□□□ -1.31
CCDC171-205ENST00000472806 C7orf66A4D0T2 115 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 LIPT2A6NK58 231 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 D6RAR5 112 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 DCTN6O00399 190 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 TLX3O43711 291 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 C1QBP02746 253 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 TCRBP04435 133 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 UBCP0CG48 685 aaKnown RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 ACHEP22303 614 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 S100A1P23297 94 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 DCTDP32321 178 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 GDNFP39905 211 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 SOX2P48431 317 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 DNASE1L1P49184 302 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 CD83Q01151 205 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 SSBP1Q04837 148 aaKnown RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 FOXF1Q12946 379 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 CDK10Q15131 360 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 RAB11BQ15907 218 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 SLC36A2Q495M3 483 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 WDR38Q5JTN6 314 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 ELFN2Q5R3F8 820 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 THEM4Q5T1C6 240 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 FAM69BQ5VUD6 431 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 TMEM244Q5VVB8 128 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 C1QL3Q5VWW1 255 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 CD276Q5ZPR3 534 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 FAM199XQ6PEV8 388 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 TSSK4Q6SA08 328 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 TMPRSS9Q7Z410 1059 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 FGD2Q7Z6J4 655 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 LRRTM1Q86UE6 522 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 SIAH3Q8IW03 269 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 UEVLDQ8IX04 471 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 SYNPRQ8TBG9 265 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 M1APQ8TC57 530 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 ELP5Q8TE02 316 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 RGP1Q92546 391 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 MCHR2Q969V1 340 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 TMEM106AQ96A25 262 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 C8orf44Q96CB5 159 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 SPACA9Q96E40 222 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 ZC3H10Q96K80 434 aaKnown RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 ABHD6Q9BV23 337 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 GTPBP2Q9BX10 602 aaKnown RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 CACNG6Q9BXT2 260 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 GON7Q9BXV9 100 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 OR11A1Q9GZK7 315 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 MOB1AQ9H8S9 216 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 RANGRFQ9HD47 186 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-205ENST00000472806 EMC7Q9NPA0 242 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 MED11Q9P086 117 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 HHLA2Q9UM44 414 aa6.84□□□□□ -1.31
CCDC171-205ENST00000472806 CLEC4AQ9UMR7 237 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms