RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 M0R233 179 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 KRT36O76013 467 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 ADRA2AP08913 450 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 CCL2P13500 99 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 APEHP13798 732 aaKnown RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 MSR1P21757 451 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 STOMP27105 288 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 APEX1P27695 318 aaKnown RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 LAP3P28838 519 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 RRM2P31350 389 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 UCP2P55851 309 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 KRR1Q13601 381 aaKnown RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 TRIM25Q14258 630 aaKnown RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 MESTQ5EB52 335 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 RGS7BPQ6MZT1 257 aaPredicted RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 SMARCD3Q6STE5 483 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 UNQ6126/PRO20091Q6UXV3 157 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 ZNF540Q8NDQ6 660 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 CPEB3Q8NE35 698 aaKnown RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 PIMREGQ9BSJ6 248 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 C1orf21Q9H246 121 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 REV1Q9UBZ9 1251 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 GPR160Q9UJ42 338 aa14.67□□□□□ -0.06
COMMD3-210ENST00000472610 PRPF19Q9UMS4 504 aaKnown RBP14.67□□□□□ -0.06
COMMD3-210ENST00000472610 A0A096LNT2 108 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 TEX13CA0A0J9YWL9 993 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 C12orf71A8MTZ7 269 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 H7C1C5 153 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 TLX2O43763 284 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-210ENST00000472610 CD5LO43866 347 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 OR10H3O60404 316 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 LCKP06239 509 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 FAM157BP0CG42 384 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 T-ENOLP0DO92 83 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 USF1P22415 310 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-210ENST00000472610 HMGA2P52926 109 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 LCN6P62502 163 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 PSG4Q00888 419 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 KRTAP1-1Q07627 177 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 MSMPQ1L6U9 139 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 CYP2R1Q6VVX0 501 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 RINLQ6ZS11 566 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 ZER1Q7Z7L7 766 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 ADCK1Q86TW2 530 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 DHFR2Q86XF0 187 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 C1orf174Q8IYL3 243 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 PAQR4Q8N4S7 273 aaPredicted RBP14.66□□□□□ -0.06
COMMD3-210ENST00000472610 LINC00471Q8N535 108 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 C11orf40Q8WZ69 217 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 SYT3Q9BQG1 590 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 POLE4Q9NR33 117 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 EIF3KQ9UBQ5 218 aaKnown RBP14.66□□□□□ -0.06
COMMD3-210ENST00000472610 DUSP13Q9UII6 198 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 IER3IP1Q9Y5U9 82 aa14.66□□□□□ -0.06
COMMD3-210ENST00000472610 NIPBLQ6KC79 2804 aaeCLIP14.66□□□□□ -0.06
COMMD3-210ENST00000472610 CHD3Q12873 2000 aaKnown RBP14.66□□□□□ -0.06
COMMD3-210ENST00000472610 VWC2LB2RUY7 222 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 IMPA2O14732 288 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 KHDRBS3O75525 346 aaKnown RBP14.65□□□□□ -0.06
COMMD3-210ENST00000472610 TXNDC12O95881 172 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 DAOP14920 347 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 CCNOP22674 350 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 FPR3P25089 353 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 SLC6A6P31641 620 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 GDI2P50395 445 aaKnown RBP14.65□□□□□ -0.06
COMMD3-210ENST00000472610 FXYD6P3P58550 94 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 CARTPTQ16568 116 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 MOGQ16653 247 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 RFX4Q33E94 735 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 LCN8Q6JVE9 175 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 C1orf94Q6P1W5 598 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 THSD4Q6ZMP0 1018 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 ZCCHC24Q8N2G6 241 aaKnown RBP14.65□□□□□ -0.06
COMMD3-210ENST00000472610 SYNPRQ8TBG9 265 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 GNPDA2Q8TDQ7 276 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 RASD2Q96D21 266 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 POM121L2Q96KW2 1035 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 FOXN4Q96NZ1 517 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 GPA33Q99795 319 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 OR2H1Q9GZK4 316 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 MAGIXQ9H6Y5 334 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 VSX1Q9NZR4 365 aaPredicted RBP14.65□□□□□ -0.06
COMMD3-210ENST00000472610 IL20RAQ9UHF4 553 aa14.65□□□□□ -0.06
COMMD3-210ENST00000472610 YLPM1P49750 1951 aaKnown RBP14.64□□□□□ -0.07
COMMD3-210ENST00000472610 A0A1W2PPW3 197 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 SOCS2O14508 198 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 SLC16A7O60669 478 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 STAMBPO95630 424 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 IGFBP1P08833 259 aaPredicted RBP14.64□□□□□ -0.07
COMMD3-210ENST00000472610 ZNF250P15622 560 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 ATP6V1B2P21281 511 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 NR4A2P43354 598 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 MAGEA2P43356 314 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 GSSP48637 474 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 KLF3P57682 345 aaPredicted RBP14.64□□□□□ -0.07
COMMD3-210ENST00000472610 ENDOGQ14249 297 aaKnown RBP14.64□□□□□ -0.07
COMMD3-210ENST00000472610 TMEM249Q2WGJ8 235 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 LRP11Q86VZ4 500 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 ZNF786Q8N393 782 aa14.64□□□□□ -0.07
COMMD3-210ENST00000472610 AKR7LQ8NHP1 331 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms