RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 STOMP27105 288 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 LAP3P28838 519 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 APLNRP35414 380 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 MPV17P39210 176 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 KLF3P57682 345 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-203ENST00000471344 CCL8P80075 99 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 PSG4Q00888 419 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 PLP2Q04941 152 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF730Q6ZMV8 503 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 FKBP9P1Q75LS8 142 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 DPPA2Q7Z7J5 298 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 OAFQ86UD1 273 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 SYNPRQ8TBG9 265 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 ACOT11Q8WXI4 607 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-203ENST00000471344 FAM162AQ96A26 154 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 KCTD14Q9BQ13 255 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-203ENST00000471344 ALG12Q9BV10 488 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 NSRP1Q9H0G5 558 aaKnown RBP13.12□□□□□ -0.31
COL1A1-203ENST00000471344 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 CCNB1IP1Q9NPC3 277 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
COL1A1-203ENST00000471344 C5orf49A4QMS7 147 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 IMPA2O14732 288 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 CDC14BO60729 498 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 SLC9A3P48764 834 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 CDH15P55291 814 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 PSME3P61289 254 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 ENDOGQ14249 297 aaKnown RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 KRTAP24-1Q3LI83 254 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 MESTQ5EB52 335 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 UGT2A3Q6UWM9 527 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 HACD2Q6Y1H2 254 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 MBOAT2Q6ZWT7 520 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 RNF148Q8N7C7 305 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 FAM156AQ8NDB6 213 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 OR1J1Q8NGS3 322 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 CLDND2Q8NHS1 167 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 RDH5Q92781 318 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 Q96M85 177 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 HOPXQ9BPY8 73 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 NMNAT1Q9HAN9 279 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 LPAR2Q9HBW0 351 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 HINT3Q9NQE9 182 aaKnown RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
COL1A1-203ENST00000471344 CACNG2Q9Y698 323 aa13.11□□□□□ -0.31
COL1A1-203ENST00000471344 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 FAM157AC9JC47 383 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 DIRAS1O95057 198 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 PTHP01270 115 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 ACHEP22303 614 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 IFNA8P32881 189 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 RBMXP38159 391 aaKnown RBP13.1□□□□□ -0.31
COL1A1-203ENST00000471344 DBPQ10586 325 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-203ENST00000471344 TAF11Q15544 211 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 THEM4Q5T1C6 240 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 FAM27BQ5VT28 67 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 FOXL2NBQ6ZUU3 175 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 LINC01356Q8N9X3 169 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 OR1J2Q8NGS2 313 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 IPCEF1Q8WWN9 437 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-203ENST00000471344 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 HPS1Q92902 700 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 RASD2Q96D21 266 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 C1orf159Q96HA4 380 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 ZNF416Q9BWM5 594 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 OR2H1Q9GZK4 316 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 KCNN2Q9H2S1 579 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 V9GYQ6 96 aa13.1□□□□□ -0.31
COL1A1-203ENST00000471344 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 NDUFAB1O14561 156 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 PPIHO43447 177 aaKnown RBP13.09□□□□□ -0.31
COL1A1-203ENST00000471344 NGFP01138 241 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 CST2P09228 141 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
COL1A1-203ENST00000471344 RAD52P43351 418 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 FXYD6P3P58550 94 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 SEC23BQ15437 767 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 TSTQ16762 297 aaKnown RBP13.09□□□□□ -0.31
COL1A1-203ENST00000471344 AVPI1Q5T686 147 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 TMPRSS11FQ6ZWK6 438 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 FAM122BQ7Z309 247 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
COL1A1-203ENST00000471344 MARS2Q96GW9 593 aaKnown RBP13.09□□□□□ -0.31
COL1A1-203ENST00000471344 RBP7Q96R05 134 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms