RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SH2D1BO14796 132 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CASKO14936 926 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 TAPBPO15533 448 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PSTPIP1O43586 416 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PRKAB2O43741 272 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CHST1O43916 411 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 GMDSO60547 372 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SLC19A2O60779 497 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ENTPD5O75356 428 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PSIP1O75475 530 aaKnown RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 LDOC1O95751 146 aaPredicted RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 HLA-HP01893 362 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 OCM2P0CE71 109 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CCDC166P0CW27 439 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PSKH1P11801 424 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 H2AFXP16104 143 aaPredicted RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PGAM1P18669 254 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 RAB4AP20338 218 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 BCKDHBP21953 392 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 HMGB2P26583 209 aaKnown RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ACVR1BP36896 505 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 OR3A4PP47883 348 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 OR1D4P47884 311 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 P2RY1P47900 373 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CX3CR1P49238 355 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CCR8P51685 355 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 HSPA2P54652 639 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ARF6P62330 175 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 NTHL1P78549 312 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF33AQ06730 810 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ZP4Q12836 540 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 TSPAN31Q12999 210 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 C1orf61Q13536 156 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 KLF5Q13887 457 aaPredicted RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 TFDP1Q14186 410 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 TMED2Q15363 201 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 OR4D1Q15615 310 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SLC15A2Q16348 729 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 IL17AQ16552 155 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 EXOC3L4Q17RC7 722 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 NDUFAF6Q330K2 333 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 BEND6Q5SZJ8 279 aaPredicted RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ERCC6L2Q5T890 1561 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PRMT9Q6P2P2 845 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ENPP6Q6UWR7 440 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF562Q6V9R5 426 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SLC13A5Q86YT5 568 aaPredicted RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SLC35F2Q8IXU6 374 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 IQCKQ8N0W5 287 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CSNK1A1LQ8N752 337 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 LGALS14Q8TCE9 139 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PTPRUQ92729 1446 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SDSLQ96GA7 329 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SERPINB11Q96P15 392 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 TAAR1Q96RJ0 339 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CYP2S1Q96SQ9 504 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 PARD6GQ9BYG4 376 aaPredicted RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ELOVL4Q9GZR5 314 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 WDR54Q9H977 334 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 FOLH1BQ9HBA9 442 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ESM1Q9NQ30 184 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 INPP5EQ9NRR6 644 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 NECAP2Q9NVZ3 263 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 MRPL39Q9NYK5 338 aaKnown RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 STMN3Q9NZ72 180 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 GHRLQ9UBU3 117 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 SLC2A6Q9UGQ3 507 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 C3orf18Q9UK00 162 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 KLK12Q9UKR0 248 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 EIF3LQ9Y262 564 aaKnown RBP3.23□□□□□ -1.89
COL11A1-208ENST00000470170 HYOU1Q9Y4L1 999 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 TIMM22Q9Y584 194 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 USP16Q9Y5T5 823 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 FLVCR1Q9Y5Y0 555 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 ALG6Q9Y672 507 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 USP47Q96K76 1375 aa3.23□□□□□ -1.89
COL11A1-208ENST00000470170 CDHR2Q9BYE9 1310 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 CDC42BPBQ9Y5S2 1711 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 TRBV9A0A0B4J1U6 114 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 SAGE2PA6NJ88 616 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 ARGFXA6NJG6 315 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 TRIM49D1C9J1S8 452 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 SMLR1H3BR10 107 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 SLC17A2O00624 439 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 PRMT5O14744 637 aaPredicted RBP3.22□□□□□ -1.89
COL11A1-208ENST00000470170 SNAI2O43623 268 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 GATCO43716 136 aaKnown RBP3.22□□□□□ -1.89
COL11A1-208ENST00000470170 RAMP3O60896 148 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 IFNA14P01570 189 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 GAPDHP04406 335 aaKnown RBP3.22□□□□□ -1.89
COL11A1-208ENST00000470170 P04436 131 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 IFNW1P05000 195 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 ZNF43P17038 809 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 FUT3P21217 361 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 ZP3P21754 424 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 IGFBP5P24593 272 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 HTR2CP28335 458 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 MAS1LP35410 378 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 CSKP41240 450 aa3.22□□□□□ -1.89
COL11A1-208ENST00000470170 SLC1A1P43005 524 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms