RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SEMA4BQ9NPR2 832 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SEMA4GQ9NTN9 838 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM38BQ9NVV0 291 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 C19orf73Q9NVV2 129 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 OR6C3Q9NZP0 311 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 THAP10Q9P2Z0 257 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SLC25A10Q9UBX3 287 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PRODH2Q9UF12 536 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 VPREB3Q9UKI3 123 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 RAB22AQ9UL26 194 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PDE10AQ9Y233 779 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 SPIN1Q9Y657 262 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 KIAA0556O60303 1618 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TP53BP1Q12888 1972 aaPredicted RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ITSN1Q15811 1721 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 ARHGEF28Q8N1W1 1705 aaKnown RBP4.63□□□□□ -1.67
COL3A1-205ENST00000470167 TNS3Q68CZ2 1445 aa4.63□□□□□ -1.67
COL3A1-205ENST00000470167 PHIPQ8WWQ0 1821 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 MEIKINA0A087WXM9 373 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OR5H15A6NDH6 313 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OR5H1A6NKK0 313 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF726A6NNF4 738 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PPP5D1E7EU14 171 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 MANBAO00462 879 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 RS1O15537 224 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TYROBPO43914 113 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 NRP2O60462 931 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SCELO95171 688 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 GJB5O95377 273 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CNIH1O95406 144 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 FABP3P05413 133 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 DCNP07585 359 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CST2P09228 141 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SLC2A2P11168 524 aaPredicted RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SELEP16581 610 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TPSB2P20231 275 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 FUT3P21217 361 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 GDF1P27539 372 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CHRNB4P30926 498 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CCKARP32238 428 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CCKBRP32239 447 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CSF2RBP32927 897 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PBX3P40426 434 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 RGRP47804 291 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TIRAPP58753 221 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TIMM10P62072 90 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ACVR1Q04771 509 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 BAXQ07812 192 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 C2orf80Q0P641 193 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 FUT7Q11130 342 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CRMP1Q14194 572 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ELAVL3Q14576 367 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PSG5Q15238 335 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TSNQ15631 228 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TPSAB1Q15661 275 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ITPRIPL2Q3MIP1 535 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 UNC50Q53HI1 259 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PRAMEF17Q5VTA0 474 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM244Q5VVB8 128 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 BICRALQ6AI39 1079 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM225Q6GV28 225 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 EIF5AL1Q6IS14 154 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PRR27Q6MZM9 219 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 RNASEKQ6P5S7 137 aaKnown RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SLC23A3Q6PIS1 610 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OLIG3Q7RTU3 272 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OR2W3Q7Z3T1 314 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ATG4DQ86TL0 474 aaPredicted RBP4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OAFQ86UD1 273 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 NIT1Q86X76 327 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PROSER1Q86XN7 944 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CBWD2Q8IUF1 395 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 LAS2Q8IYD9 372 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 UBALD2Q8IYN6 164 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 HIST3H2BBQ8N257 126 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 JAGN1Q8N5M9 183 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SIRT6Q8N6T7 355 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SLC38A9Q8NBW4 561 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OR9G4Q8NGQ1 327 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OR1P1Q8NH06 330 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SLC7A13Q8TCU3 470 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 GPR119Q8TDV5 335 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF480Q8WV37 535 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 IGSF8Q969P0 613 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 PYCR2Q96C36 320 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ELMOD3Q96FG2 381 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SMARCD1Q96GM5 515 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 VSTM2LQ96N03 204 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 GUCD1Q96NT3 240 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 OR2M4Q96R27 311 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CPXM1Q96SM3 734 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 GPR20Q99678 358 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 C20orf24Q9BUV8 137 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CHRNA10Q9GZZ6 450 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 TXNIPQ9H3M7 391 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 MS4A5Q9H3V2 200 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 SRMSQ9H3Y6 488 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 ALG9Q9H6U8 611 aa4.62□□□□□ -1.67
COL3A1-205ENST00000470167 CALHM2Q9HA72 323 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms