RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SCPEP1Q9HB40 452 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 RDH8Q9NYR8 311 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ZNF107Q9UII5 783 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 CDV3Q9UKY7 258 aaKnown RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 H3BUI4 141 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SLC16A7O60669 478 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 CD3DP04234 171 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 GP1BBP13224 206 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ZNF35P13682 527 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ZP3P21754 424 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 IL12BP29460 328 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 OR1D4P47884 311 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 PNLIPRP2P54317 469 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 DCAF12L2Q5VW00 463 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 GLT8D1Q68CQ7 371 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 CHMP1BQ7LBR1 199 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 LYPD6Q86Y78 171 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 GABRG1Q8N1C3 465 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SPERTQ8NA61 448 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 STK35Q8TDR2 534 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SCARB1Q8WTV0 552 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 PPP1R14AQ96A00 147 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 KCNK15Q9H427 330 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ZNF224Q9NZL3 707 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 PCDH15Q96QU1 1955 aa12.27□□□□□ -0.44
BRCA1-209ENST00000470026 TMED7-TICAM2A0A0A6YYA0 188 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 LOC390937A0A1W2PQ73 354 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 A0A1W2PR77 199 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 A6NJ64 397 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 A8MVM7 634 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 PLPP3O14495 311 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 FADS1O60427 444 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 SLC25A12O75746 678 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 AQP8O94778 261 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 LPLP06858 475 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 POU3F2P20265 443 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-209ENST00000470026 PTGS2P35354 604 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 RIDAP52758 137 aaKnown RBP12.27□□□□□ -0.45
BRCA1-209ENST00000470026 TAS2R19P59542 299 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 RAB30Q15771 203 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 OGFOD3Q6PK18 319 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 TSSK4Q6SA08 328 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 Q6ZS52 159 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 OR6S1Q8NH40 331 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-209ENST00000470026 SLC41A2Q96JW4 573 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 GAL3ST4Q96RP7 486 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 NRSN2Q9GZP1 204 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 SLCO5A1Q9H2Y9 848 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 SDHAF2Q9NX18 166 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 DHDHQ9UQ10 334 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 TMED7Q9Y3B3 224 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 RHBDD3Q9Y3P4 386 aa12.27□□□□□ -0.45
BRCA1-209ENST00000470026 H3BSH0 61 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ARPC5O15511 151 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 RP2O75695 350 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 SIX6O95475 246 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 HLA-DQA2P01906 255 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 CD74P04233 296 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 RLN1P04808 185 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 SPARCP09486 303 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 FBXO45P0C2W1 286 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 RPA2P15927 270 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 NR0B1P51843 470 aaKnown RBP12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ETFDHQ16134 617 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PCK2Q16822 640 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ARHGAP40Q5TG30 622 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 C5orf46Q6UWT4 87 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 TTLL10Q6ZVT0 673 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 NDUFAF7Q7L592 441 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 GRINAQ7Z429 371 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PRSS42Q7Z5A4 293 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PLPP7Q8NBV4 271 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 OR52N5Q8NH56 324 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 GPR119Q8TDV5 335 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 LMX1AQ8TE12 382 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 EDAQ92838 391 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PTX4Q96A99 478 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 OMA1Q96E52 524 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 SLC25A21Q9BQT8 299 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-209ENST00000470026 EDEM2Q9BV94 578 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 WWTR1Q9GZV5 400 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 CHST6Q9GZX3 395 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ATG5Q9H1Y0 275 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 LRP12Q9Y561 859 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 MYO9BQ13459 2157 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-209ENST00000470026 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-209ENST00000470026 MEGF11A6BM72 1044 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 FTCDNL1E5RQL4 147 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 GOSR2O14653 212 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 OR6A2O95222 327 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PMS2P2O95744 297 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ISG15P05161 165 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms