RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 GUSBP08236 651 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 HOXC4P09017 264 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 PTHLHP12272 177 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ADRA2CP18825 462 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 CCKBRP32239 447 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 STARP49675 285 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 NANOS3P60323 173 aaKnown RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 BTN3A2P78410 334 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 LTBQ06643 244 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 CLN3Q13286 438 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 C1orf61Q13536 156 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 TOMM20Q15388 145 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 HFEQ30201 348 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ARHGAP40Q5TG30 622 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 JMJD6Q6NYC1 403 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 DPY19L2P2Q6ZN68 376 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 PGAP1Q75T13 922 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 RAB11FIP2Q7L804 512 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 GKN2Q86XP6 184 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ARMC10Q8N2F6 343 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 SVBPQ8N300 66 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 RELL2Q8NC24 303 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 SDR9C7Q8NEX9 313 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 OR4K13Q8NH42 304 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 SLC25A21Q9BQT8 299 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 LGR4Q9BXB1 951 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 TRIM2Q9C040 744 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 TMEM138Q9NPI0 162 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ACTR10Q9NZ32 417 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ATXN7L1Q9ULK2 861 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-205ENST00000469550 CFAP46Q8IYW2 2715 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 A0A1B0GTI1 187 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 A0A1B0GWA3 101 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 KANTRA0A1W2PQU2 76 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 GGT3PA6NGU5 568 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 J3QKU1 62 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 PEX12O00623 359 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 BCL2L11O43521 198 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 GLCEO94923 617 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 PNLIPP16233 465 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 SPI1P17947 270 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 CMPK1P30085 196 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 MAP3K8P41279 467 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 PLAURQ03405 335 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 MELKQ14680 651 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 PAN3Q58A45 887 aaKnown RBP8.66□□□□□ -1.02
HDAC3-205ENST00000469550 C11orf88Q6PI97 169 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF227Q86WZ6 799 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 C12orf45Q8N5I9 185 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-205ENST00000469550 NPEPL1Q8NDH3 523 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 WDR92Q96MX6 357 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 APOOQ9BUR5 198 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 XKR8Q9H6D3 395 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 BIN3Q9NQY0 253 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 SLC17A5Q9NRA2 495 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 COA4Q9NYJ1 87 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 FLRT3Q9NZU0 649 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 MLXQ9UH92 298 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 STEAP1Q9UHE8 339 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 TNFSF18Q9UNG2 199 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 IER3IP1Q9Y5U9 82 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 KALRNO60229 2985 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 TRBV5-7A0A0A0MS05 114 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 TMEM218A2RU14 115 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 PMS2P1A4D2B8 440 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 NUDT19A8MXV4 375 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 F8W036 122 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 SULT1C2O00338 296 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 ADAM11O75078 769 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 TNFSF15O95150 251 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 APOC1P02654 83 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 CELA2BP08218 269 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-205ENST00000469550 CPMP14384 443 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 DCDP81605 110 aaKnown RBP8.66□□□□□ -1.02
HDAC3-205ENST00000469550 ALKBH1Q13686 389 aaKnown RBP8.66□□□□□ -1.02
HDAC3-205ENST00000469550 RPE65Q16518 533 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 LY6G6FQ5SQ64 297 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 C10orf91Q5T1B1 145 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 GLT8D1Q68CQ7 371 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 OGFOD3Q6PK18 319 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 COX18Q8N8Q8 333 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 CLEC1AQ8NC01 280 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 OR51S1Q8NGJ8 323 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF417Q8TAU3 575 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 NT5CQ8TCD5 201 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 THRSPQ92748 146 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 CCDC74AQ96AQ1 378 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 C12orf57Q99622 126 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 STRADBQ9C0K7 418 aa8.66□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF462Q96JM2 2506 aa8.65□□□□□ -1.02
HDAC3-205ENST00000469550 A0A1W2PQM1 296 aa8.65□□□□□ -1.02
HDAC3-205ENST00000469550 DISC1C4P0D8 188 aa8.65□□□□□ -1.02
HDAC3-205ENST00000469550 PRSS44E7EML9 344 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms