RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SLC25A40Q8TBP6 338 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 KLF14Q8TD94 323 aaPredicted RBP10.37□□□□□ -0.75
COL5A1-207ENST00000469093 IPCEF1Q8WWN9 437 aaPredicted RBP10.37□□□□□ -0.75
COL5A1-207ENST00000469093 NABP1Q96AH0 204 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 OR2J1Q9GZK6 312 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 KCNN2Q9H2S1 579 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 KAT8Q9H7Z6 458 aaKnown RBP10.37□□□□□ -0.75
COL5A1-207ENST00000469093 NANOGQ9H9S0 305 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 CCNB1IP1Q9NPC3 277 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 INIPQ9NRY2 104 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 C20orf141Q9NUB4 165 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 DDX28Q9NUL7 540 aaKnown RBP10.37□□□□□ -0.75
COL5A1-207ENST00000469093 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
COL5A1-207ENST00000469093 PPIAL4AQ9Y536 164 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 PCDHGB1Q9Y5G3 927 aa10.37□□□□□ -0.75
COL5A1-207ENST00000469093 PPIAL4EA0A075B759 164 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 PPIAL4CA0A0B4J2A2 164 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 PLSCR5A0PG75 271 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 MCIDASD6RGH6 385 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 PPIAL4DF5H284 164 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 TMPRSS2O15393 492 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 NGFP01138 241 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 TSPAN19P0C672 248 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 PPIAL4FP0DN26 164 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 HKR1P10072 659 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 LIPAP38571 399 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 GDI2P50395 445 aaKnown RBP10.36□□□□□ -0.75
COL5A1-207ENST00000469093 DAP3P51398 398 aaKnown RBP10.36□□□□□ -0.75
COL5A1-207ENST00000469093 FMODQ06828 376 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 SLC3A1Q07837 685 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 FOXL1Q12952 345 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 HNRNPA0Q13151 305 aaKnown RBP10.36□□□□□ -0.75
COL5A1-207ENST00000469093 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 SGCAQ16586 387 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 FAM27BQ5VT28 67 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 SLC25A47Q6Q0C1 308 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 DHDDSQ86SQ9 333 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 NKAIN4Q8IVV8 208 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 OR10A6Q8NH74 314 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 AKR7LQ8NHP1 331 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 MOSPD2Q8NHP6 518 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 PFN4Q8NHR9 129 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 LRRC8CQ8TDW0 803 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 SLC26A7Q8TE54 656 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 NSMAFQ92636 917 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 HDAC2Q92769 488 aaKnown RBP10.36□□□□□ -0.75
COL5A1-207ENST00000469093 LRRC58Q96CX6 371 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 EGLN1Q9GZT9 426 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 RABEP2Q9H5N1 569 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 SMURF2Q9HAU4 748 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 MMP26Q9NRE1 261 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 CYSLTR2Q9NS75 346 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 UBAP1Q9NZ09 502 aa10.36□□□□□ -0.75
COL5A1-207ENST00000469093 ISPDA4D126 451 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 FOXH1O75593 365 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 OR7A10O76100 309 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 IGF2P01344 180 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 CD55P08174 381 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 SBK2P0C263 348 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 PCGF2P35227 344 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 RBMXP38159 391 aaKnown RBP10.35□□□□□ -0.75
COL5A1-207ENST00000469093 GZMMP51124 257 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 PPP1CBP62140 327 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 ERVK-25P63136 954 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 UNQ6126/PRO20091Q6UXV3 157 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 CCDC80Q76M96 950 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 HDDC2Q7Z4H3 204 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 SLC30A8Q8IWU4 369 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 C1orf174Q8IYL3 243 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 SIGLECL1Q8N7X8 197 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 DEFB108BQ8NET1 73 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 ABHD4Q8TB40 342 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 ST7LQ8TDW4 575 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 TMEM255BQ8WV15 326 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 LIPHQ8WWY8 451 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 GEMIN6Q8WXD5 167 aaKnown RBP10.35□□□□□ -0.75
COL5A1-207ENST00000469093 SGTBQ96EQ0 304 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 C1QTNF5Q9BXJ0 243 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 OR2H1Q9GZK4 316 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 ZNF696Q9H7X3 374 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 MSL2Q9HCI7 577 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 NPHS2Q9NP85 383 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 INTS9Q9NV88 658 aaKnown RBP10.35□□□□□ -0.75
COL5A1-207ENST00000469093 DCAF16Q9NXF7 216 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 STX18Q9P2W9 335 aaKnown RBP10.35□□□□□ -0.75
COL5A1-207ENST00000469093 ZDHHC8Q9ULC8 765 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 SH3GLB1Q9Y371 365 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 NPTNQ9Y639 398 aa10.35□□□□□ -0.75
COL5A1-207ENST00000469093 MEGF8Q7Z7M0 2845 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 TRAPPC2LH3BP13 241 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 ANGPT2O15123 496 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 ICMTO60725 284 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 PRTN3P24158 256 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 LAP3P28838 519 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 RBM34P42696 430 aaKnown RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 PIN1Q13526 163 aaPredicted RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 NFYCQ13952 458 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 VMACQ2NL98 169 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 INTS11Q5TA45 600 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms